Lobaria pulmonaria Spain extracted metagenome v1.0

Identified secondary metabolite regions using strictness 'relaxed'

scaffold_100

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	NRPS,indole	70,928	111,449

scaffold_102

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	indole	20,498	51,700

scaffold_106

Region	Type	From	To	Most similar known cluster		Similarity
Region 69.1	terpene	81,859	106,923

scaffold_111

Region	Type	From	To	Most similar known cluster		Similarity
Region 125.1	T1PKS	18,156	84,943	waikikiamide A/waikikiamide B/waikikiamide C/(+)-semivioxanthin/semivioxanthin	Polyketide	36%

scaffold_112

Region	Type	From	To	Most similar known cluster		Similarity
Region 136.1	NRPS,T1PKS	46,470	103,161

scaffold_1153

Region	Type	From	To	Most similar known cluster		Similarity
Region 173.1	fungal-RiPP-like	1	4,554

scaffold_12

Region	Type	From	To	Most similar known cluster		Similarity
Region 224.1	T1PKS	1	64,544

scaffold_121

Region	Type	From	To	Most similar known cluster		Similarity
Region 236.1	terpene	1	31,011

scaffold_13

Region	Type	From	To	Most similar known cluster		Similarity
Region 293.1	T1PKS	192,734	261,711	betaenone A/betaenone B/betaenone C	Polyketide	37%

scaffold_132

Region	Type	From	To	Most similar known cluster		Similarity
Region 296.1	NRPS	16,950	93,835	fellutamide B	NRP	57%

scaffold_140

Region	Type	From	To	Most similar known cluster		Similarity
Region 305.1	fungal-RiPP-like,terpene	1	85,696

scaffold_148

Region	Type	From	To	Most similar known cluster		Similarity
Region 313.1	fungal-RiPP-like	3,349	89,133

scaffold_154

Region	Type	From	To	Most similar known cluster		Similarity
Region 320.1	indole	1	25,270

scaffold_156

Region	Type	From	To	Most similar known cluster		Similarity
Region 322.1	T1PKS	32,496	86,917	ochratoxin A	NRP+Polyketide	100%

scaffold_17

Region	Type	From	To	Most similar known cluster		Similarity
Region 337.1	T1PKS	18,966	87,522
Region 337.2	fungal-RiPP-like	109,529	202,047

scaffold_191

Region	Type	From	To	Most similar known cluster		Similarity
Region 361.1	T1PKS,NRPS	1	70,526	flavichalasine F/flavichalasine G/aspochalasin C/aspochalasin E/aspochalasin M/TMC-169/aspergillin PZ	Polyketide+NRP	54%

scaffold_192

Region	Type	From	To	Most similar known cluster		Similarity
Region 362.1	fungal-RiPP-like	1	57,734

scaffold_20

Region	Type	From	To	Most similar known cluster		Similarity
Region 371.1	T1PKS	1	61,835	ankaflavin/monascin/rubropunctatine/monascorubrin	Polyketide:Iterative type I polyketide	20%

scaffold_202

Region	Type	From	To	Most similar known cluster		Similarity
Region 374.1	fungal-RiPP-like	23,311	74,457

scaffold_203

Region	Type	From	To	Most similar known cluster		Similarity
Region 375.1	T1PKS,terpene	1	74,452

scaffold_205

Region	Type	From	To	Most similar known cluster		Similarity
Region 377.1	fungal-RiPP-like	1	74,035

scaffold_206

Region	Type	From	To	Most similar known cluster		Similarity
Region 378.1	T1PKS,NRPS	1	42,860

scaffold_207

Region	Type	From	To	Most similar known cluster		Similarity
Region 379.1	T1PKS	25,450	73,897

scaffold_209

Region	Type	From	To	Most similar known cluster		Similarity
Region 381.1	fungal-RiPP-like	1	73,557

scaffold_21

Region	Type	From	To	Most similar known cluster		Similarity
Region 382.1	NRPS-like	34,202	97,629

scaffold_212

Region	Type	From	To	Most similar known cluster		Similarity
Region 385.1	T1PKS	1	59,825

scaffold_22

Region	Type	From	To	Most similar known cluster		Similarity
Region 393.1	indole	184,140	215,243

scaffold_226

Region	Type	From	To	Most similar known cluster		Similarity
Region 400.1	fungal-RiPP-like	1	70,212

scaffold_228

Region	Type	From	To	Most similar known cluster		Similarity
Region 402.1	fungal-RiPP-like	1	69,813

scaffold_25

Region	Type	From	To	Most similar known cluster		Similarity
Region 426.1	T1PKS	102,944	170,865	usnic acid	Polyketide	26%

scaffold_250

Region	Type	From	To	Most similar known cluster		Similarity
Region 427.1	T1PKS	16,088	65,610

scaffold_26

Region	Type	From	To	Most similar known cluster		Similarity
Region 437.1	fungal-RiPP-like	173,776	224,780

scaffold_260

Region	Type	From	To	Most similar known cluster		Similarity
Region 438.1	T1PKS	1	54,930	naphthopyrone	Polyketide	100%

scaffold_271

Region	Type	From	To	Most similar known cluster		Similarity
Region 450.1	T1PKS	19,279	62,581

scaffold_274

Region	Type	From	To	Most similar known cluster		Similarity
Region 453.1	fungal-RiPP-like	8,098	61,712

scaffold_276

Region	Type	From	To	Most similar known cluster		Similarity
Region 455.1	T1PKS	641	61,509

scaffold_287

Region	Type	From	To	Most similar known cluster		Similarity
Region 467.1	fungal-RiPP-like	1	47,473

scaffold_295

Region	Type	From	To	Most similar known cluster		Similarity
Region 476.1	T1PKS,NRPS-like	6,608	58,006	2,4-dihydroxy-5,6-dimethyl benzaldehyde	Polyketide	28%

scaffold_313

Region	Type	From	To	Most similar known cluster		Similarity
Region 497.1	NRPS	1	55,637

scaffold_318

Region	Type	From	To	Most similar known cluster		Similarity
Region 502.1	fungal-RiPP-like	1	55,000

scaffold_323

Region	Type	From	To	Most similar known cluster		Similarity
Region 508.1	T1PKS	1	53,573

scaffold_335

Region	Type	From	To	Most similar known cluster		Similarity
Region 521.1	fungal-RiPP-like	1	52,465

scaffold_338

Region	Type	From	To	Most similar known cluster		Similarity
Region 524.1	fungal-RiPP-like	1	52,359

scaffold_339

Region	Type	From	To	Most similar known cluster		Similarity
Region 525.1	terpene	1	18,215

scaffold_340

Region	Type	From	To	Most similar known cluster		Similarity
Region 527.1	NRPS-like	1	38,762

scaffold_346

Region	Type	From	To	Most similar known cluster		Similarity
Region 533.1	T1PKS	2,308	51,408	oxyjavanicin	Polyketide	25%

scaffold_348

Region	Type	From	To	Most similar known cluster		Similarity
Region 535.1	fungal-RiPP-like	1	51,026

scaffold_37

Region	Type	From	To	Most similar known cluster		Similarity
Region 559.1	NRPS-like	104,237	167,638

scaffold_373

Region	Type	From	To	Most similar known cluster		Similarity
Region 563.1	terpene	18,292	48,016

scaffold_379

Region	Type	From	To	Most similar known cluster		Similarity
Region 569.1	T1PKS	1	47,515

scaffold_382

Region	Type	From	To	Most similar known cluster		Similarity
Region 573.1	T1PKS	42	47,316

scaffold_399

Region	Type	From	To	Most similar known cluster		Similarity
Region 591.1	terpene	28,079	44,864

scaffold_41

Region	Type	From	To	Most similar known cluster		Similarity
Region 604.1	terpene	28,914	60,939

scaffold_410

Region	Type	From	To	Most similar known cluster		Similarity
Region 605.1	terpene	22,983	43,669	squalestatin S1	Terpene	40%

scaffold_413

Region	Type	From	To	Most similar known cluster		Similarity
Region 608.1	indole	21,205	43,579	biscognienyne B/eutypinic acid/compound 3/4-hydroxy-3-prenylbenzoic acid/prenylhydroquinone/compound 15/compound 8/compound 7/compound 6/compound 11/compound 12/pestalodiol E	Other	63%

scaffold_419

Region	Type	From	To	Most similar known cluster		Similarity
Region 614.1	NRPS-like	3,502	43,022	aspulvinone H/aspulvinone B1	NRP	100%

scaffold_428

Region	Type	From	To	Most similar known cluster		Similarity
Region 624.1	NRPS	1	42,025

scaffold_44

Region	Type	From	To	Most similar known cluster		Similarity
Region 637.1	NRPS-like	17,789	81,142

scaffold_453

Region	Type	From	To	Most similar known cluster		Similarity
Region 652.1	T1PKS	1,011	40,117	trypacidin	Polyketide	14%

scaffold_46

Region	Type	From	To	Most similar known cluster		Similarity
Region 659.1	terpene	41,088	72,314

scaffold_477

Region	Type	From	To	Most similar known cluster		Similarity
Region 678.1	NRPS-like	3,642	37,996

scaffold_5

Region	Type	From	To	Most similar known cluster		Similarity
Region 703.1	fungal-RiPP-like	12,626	103,770

scaffold_514

Region	Type	From	To	Most similar known cluster		Similarity
Region 720.1	NRPS-like	1	35,174

scaffold_52

Region	Type	From	To	Most similar known cluster		Similarity
Region 726.1	T1PKS	42,540	110,798

scaffold_520

Region	Type	From	To	Most similar known cluster		Similarity
Region 727.1	T1PKS	1	34,611	terreic acid	Polyketide	33%

scaffold_539

Region	Type	From	To	Most similar known cluster		Similarity
Region 747.1	T1PKS	1	33,183	1,3,6,8-tetrahydroxynaphthalene	Polyketide	100%

scaffold_544

Region	Type	From	To	Most similar known cluster		Similarity
Region 753.1	terpene	10,912	32,990

scaffold_551

Region	Type	From	To	Most similar known cluster		Similarity
Region 761.1	T1PKS	1	32,480

scaffold_554

Region	Type	From	To	Most similar known cluster		Similarity
Region 764.1	NRPS-like	1	32,119

scaffold_56

Region	Type	From	To	Most similar known cluster		Similarity
Region 770.1	T1PKS,NRPS	1	91,199	leucinostatin A/leucinostatin B	NRP+Polyketide	10%

scaffold_58

Region	Type	From	To	Most similar known cluster		Similarity
Region 792.1	T1PKS,NRPS-like	1	66,961	xenolozoyenone	NRP:Lipopeptide+Polyketide:Iterative type I polyketide	100%

scaffold_584

Region	Type	From	To	Most similar known cluster		Similarity
Region 797.1	terpene	2,932	30,175

scaffold_599

Region	Type	From	To	Most similar known cluster		Similarity
Region 813.1	NRPS-like	1	29,213

scaffold_619

Region	Type	From	To	Most similar known cluster		Similarity
Region 836.1	NRPS-like	1	27,441

scaffold_628

Region	Type	From	To	Most similar known cluster		Similarity
Region 846.1	NRP-metallophore,NRPS	1	26,580

scaffold_65

Region	Type	From	To	Most similar known cluster		Similarity
Region 870.1	NRPS-like	14,559	78,420

scaffold_66

Region	Type	From	To	Most similar known cluster		Similarity
Region 881.1	T1PKS	29,598	94,937	4-oxomacrophorin A/macrophorin A/5'-epimacrophorin B	Terpene	72%

scaffold_661

Region	Type	From	To	Most similar known cluster		Similarity
Region 883.1	NRPS-like	1	24,243

scaffold_684

Region	Type	From	To	Most similar known cluster		Similarity
Region 908.1	terpene	1	23,127

scaffold_69

Region	Type	From	To	Most similar known cluster		Similarity
Region 914.1	NRPS	1	42,711

scaffold_707

Region	Type	From	To	Most similar known cluster		Similarity
Region 934.1	T1PKS	1	22,157

scaffold_74

Region	Type	From	To	Most similar known cluster		Similarity
Region 970.1	fungal-RiPP-like	10,666	123,819

scaffold_79

Region	Type	From	To	Most similar known cluster		Similarity
Region 1025.1	fungal-RiPP-like	56,859	123,776

scaffold_80

Region	Type	From	To	Most similar known cluster		Similarity
Region 1037.1	T1PKS	1	62,799	monascorubrin	Polyketide	100%

scaffold_802

Region	Type	From	To	Most similar known cluster		Similarity
Region 1040.1	T1PKS	1	17,012

scaffold_81

Region	Type	From	To	Most similar known cluster		Similarity
Region 1048.1	NRPS	75,026	122,476	BII-rafflesfungin	NRP+Polyketide	15%

scaffold_884

Region	Type	From	To	Most similar known cluster		Similarity
Region 1130.1	terpene	1	13,848

scaffold_886

Region	Type	From	To	Most similar known cluster		Similarity
Region 1132.1	NRPS	1	13,807

scaffold_97

Region	Type	From	To	Most similar known cluster		Similarity
Region 1225.1	T1PKS	57,143	113,267	1,3,6,8-tetrahydroxynaphthalene	Polyketide	100%

scaffold_98

Region	Type	From	To	Most similar known cluster		Similarity
Region 1236.1	fungal-RiPP-like	27,901	112,555

No secondary metabolite regions were found in these records:: scaffold_1; scaffold_10; scaffold_1000; scaffold_1001; scaffold_1002; scaffold_1003; scaffold_1004; scaffold_1005; scaffold_1006; scaffold_1007; scaffold_1008; scaffold_1009; scaffold_101; scaffold_1010; scaffold_1011; scaffold_1012; scaffold_1013; scaffold_1014; scaffold_1015; scaffold_1016; scaffold_1017; scaffold_1018; scaffold_1019; scaffold_1020; scaffold_1021; scaffold_1022; scaffold_1023; scaffold_1024; scaffold_1025; scaffold_1026; scaffold_1027; scaffold_1028; scaffold_1029; scaffold_103; scaffold_1030; scaffold_1031; scaffold_1032; scaffold_1033; scaffold_1034; scaffold_1035; scaffold_1036; scaffold_1037; scaffold_1038; scaffold_1039; scaffold_104; scaffold_1040; scaffold_1041; scaffold_1042; scaffold_1043; scaffold_1044; scaffold_1045; scaffold_1046; scaffold_1047; scaffold_1048; scaffold_1049; scaffold_105; scaffold_1050; scaffold_1051; scaffold_1052; scaffold_1053; scaffold_1054; scaffold_1055; scaffold_1056; scaffold_1057; scaffold_1058; scaffold_1059; scaffold_1060; scaffold_1061; scaffold_1062; scaffold_1063; scaffold_1064; scaffold_1065; scaffold_1066; scaffold_1067; scaffold_1068; scaffold_1069; scaffold_107; scaffold_1070; scaffold_1071; scaffold_1072; scaffold_1073; scaffold_1074; scaffold_1075; scaffold_1076; scaffold_1077; scaffold_1078; scaffold_1079; scaffold_108; scaffold_1080; scaffold_1081; scaffold_1082; scaffold_1083; scaffold_1084; scaffold_1085; scaffold_1086; scaffold_1087; scaffold_1088; scaffold_1089; scaffold_109; scaffold_1090; scaffold_1091; scaffold_1092; scaffold_1093; scaffold_1094; scaffold_1095; scaffold_1096; scaffold_1097; scaffold_1098; scaffold_1099; scaffold_11; scaffold_110; scaffold_1100; scaffold_1101; scaffold_1102; scaffold_1103; scaffold_1104; scaffold_1105; scaffold_1106; scaffold_1107; scaffold_1108; scaffold_1109; scaffold_1110; scaffold_1111; scaffold_1112; scaffold_1113; scaffold_1114; scaffold_1115; scaffold_1116; scaffold_1117; scaffold_1118; scaffold_1119; scaffold_1120; scaffold_1121; scaffold_1122; scaffold_1123; scaffold_1124; scaffold_1125; scaffold_1126; scaffold_1127; scaffold_1128; scaffold_1129; scaffold_113; scaffold_1130; scaffold_1131; scaffold_1132; scaffold_1133; scaffold_1134; scaffold_1135; scaffold_1136; scaffold_1137; scaffold_1138; scaffold_1139; scaffold_114; scaffold_1140; scaffold_1141; scaffold_1142; scaffold_1143; scaffold_1144; scaffold_1145; scaffold_1146; scaffold_1147; scaffold_1148; scaffold_1149; scaffold_115; scaffold_1150; scaffold_1151; scaffold_1152; scaffold_1154; scaffold_1155; scaffold_1156; scaffold_1157; scaffold_1158; scaffold_1159; scaffold_116; scaffold_1160; scaffold_1161; scaffold_1162; scaffold_1163; scaffold_1164; scaffold_1165; scaffold_1166; scaffold_1167; scaffold_1168; scaffold_1169; scaffold_117; scaffold_1170; scaffold_1171; scaffold_1172; scaffold_1173; scaffold_1174; scaffold_1175; scaffold_1176; scaffold_1177; scaffold_1178; scaffold_1179; scaffold_118; scaffold_1180; scaffold_1181; scaffold_1182; scaffold_1183; scaffold_1184; scaffold_1185; scaffold_1186; scaffold_1187; scaffold_1188; scaffold_1189; scaffold_119; scaffold_1190; scaffold_1191; scaffold_1192; scaffold_1193; scaffold_1194; scaffold_1195; scaffold_1196; scaffold_1197; scaffold_1198; scaffold_1199; scaffold_120; scaffold_1200; scaffold_1201; scaffold_1202; scaffold_1203; scaffold_1204; scaffold_1205; scaffold_1206; scaffold_1207; scaffold_1208; scaffold_1209; scaffold_1210; scaffold_1211; scaffold_1212; scaffold_1213; scaffold_1214; scaffold_1215; scaffold_1216; scaffold_1217; scaffold_1218; scaffold_1219; scaffold_122; scaffold_1220; scaffold_1221; scaffold_1222; scaffold_1223; scaffold_1224; scaffold_1225; scaffold_1226; scaffold_1227; scaffold_1228; scaffold_1229; scaffold_123; scaffold_1230; scaffold_1231; scaffold_1232; scaffold_1233; scaffold_1234; scaffold_1235; scaffold_1236; scaffold_1237; scaffold_1238; scaffold_1239; scaffold_124; scaffold_1240; scaffold_1241; scaffold_1242; scaffold_1243; scaffold_1244; scaffold_1245; scaffold_1246; scaffold_1247; scaffold_1248; scaffold_1249; scaffold_125; scaffold_1250; scaffold_1251; scaffold_1252; scaffold_1253; scaffold_1254; scaffold_1255; scaffold_1256; scaffold_1257; scaffold_126; scaffold_127; scaffold_128; scaffold_129; scaffold_130; scaffold_131; scaffold_133; scaffold_134; scaffold_135; scaffold_136; scaffold_137; scaffold_138; scaffold_139; scaffold_14; scaffold_141; scaffold_142; scaffold_143; scaffold_144; scaffold_145; scaffold_146; scaffold_147; scaffold_149; scaffold_15; scaffold_150; scaffold_151; scaffold_152; scaffold_153; scaffold_155; scaffold_157; scaffold_158; scaffold_159; scaffold_16; scaffold_160; scaffold_161; scaffold_162; scaffold_163; scaffold_164; scaffold_165; scaffold_166; scaffold_167; scaffold_168; scaffold_169; scaffold_170; scaffold_171; scaffold_172; scaffold_173; scaffold_174; scaffold_175; scaffold_176; scaffold_177; scaffold_178; scaffold_179; scaffold_18; scaffold_180; scaffold_181; scaffold_182; scaffold_183; scaffold_184; scaffold_185; scaffold_186; scaffold_187; scaffold_188; scaffold_189; scaffold_19; scaffold_190; scaffold_193; scaffold_194; scaffold_195; scaffold_196; scaffold_197; scaffold_198; scaffold_199; scaffold_2; scaffold_200; scaffold_201; scaffold_204; scaffold_208; scaffold_210; scaffold_211; scaffold_213; scaffold_214; scaffold_215; scaffold_216; scaffold_217; scaffold_218; scaffold_219; scaffold_220; scaffold_221; scaffold_222; scaffold_223; scaffold_224; scaffold_225; scaffold_227; scaffold_229; scaffold_23; scaffold_230; scaffold_231; scaffold_232; scaffold_233; scaffold_234; scaffold_235; scaffold_236; scaffold_237; scaffold_238; scaffold_239; scaffold_24; scaffold_240; scaffold_241; scaffold_242; scaffold_243; scaffold_244; scaffold_245; scaffold_246; scaffold_247; scaffold_248; scaffold_249; scaffold_251; scaffold_252; scaffold_253; scaffold_254; scaffold_255; scaffold_256; scaffold_257; scaffold_258; scaffold_259; scaffold_261; scaffold_262; scaffold_263; scaffold_264; scaffold_265; scaffold_266; scaffold_267; scaffold_268; scaffold_269; scaffold_27; scaffold_270; scaffold_272; scaffold_273; scaffold_275; scaffold_277; scaffold_278; scaffold_279; scaffold_28; scaffold_280; scaffold_281; scaffold_282; scaffold_283; scaffold_284; scaffold_285; scaffold_286; scaffold_288; scaffold_289; scaffold_29; scaffold_290; scaffold_291; scaffold_292; scaffold_293; scaffold_294; scaffold_296; scaffold_297; scaffold_298; scaffold_299; scaffold_3; scaffold_30; scaffold_300; scaffold_301; scaffold_302; scaffold_303; scaffold_304; scaffold_305; scaffold_306; scaffold_307; scaffold_308; scaffold_309; scaffold_31; scaffold_310; scaffold_311; scaffold_312; scaffold_314; scaffold_315; scaffold_316; scaffold_317; scaffold_319; scaffold_32; scaffold_320; scaffold_321; scaffold_322; scaffold_324; scaffold_325; scaffold_326; scaffold_327; scaffold_328; scaffold_329; scaffold_33; scaffold_330; scaffold_331; scaffold_332; scaffold_333; scaffold_334; scaffold_336; scaffold_337; scaffold_34; scaffold_341; scaffold_342; scaffold_343; scaffold_344; scaffold_345; scaffold_347; scaffold_349; scaffold_35; scaffold_350; scaffold_351; scaffold_352; scaffold_353; scaffold_354; scaffold_355; scaffold_356; scaffold_357; scaffold_358; scaffold_359; scaffold_36; scaffold_360; scaffold_361; scaffold_362; scaffold_363; scaffold_364; scaffold_365; scaffold_366; scaffold_367; scaffold_368; scaffold_369; scaffold_370; scaffold_371; scaffold_372; scaffold_374; scaffold_375; scaffold_376; scaffold_377; scaffold_378; scaffold_38; scaffold_380; scaffold_381; scaffold_383; scaffold_384; scaffold_385; scaffold_386; scaffold_387; scaffold_388; scaffold_389; scaffold_39; scaffold_390; scaffold_391; scaffold_392; scaffold_393; scaffold_394; scaffold_395; scaffold_396; scaffold_397; scaffold_398; scaffold_4; scaffold_40; scaffold_400; scaffold_401; scaffold_402; scaffold_403; scaffold_404; scaffold_405; scaffold_406; scaffold_407; scaffold_408; scaffold_409; scaffold_411; scaffold_412; scaffold_414; scaffold_415; scaffold_416; scaffold_417; scaffold_418; scaffold_42; scaffold_420; scaffold_421; scaffold_422; scaffold_423; scaffold_424; scaffold_425; scaffold_426; scaffold_427; scaffold_429; scaffold_43; scaffold_430; scaffold_431; scaffold_432; scaffold_433; scaffold_434; scaffold_435; scaffold_436; scaffold_437; scaffold_438; scaffold_439; scaffold_440; scaffold_441; scaffold_442; scaffold_443; scaffold_444; scaffold_445; scaffold_446; scaffold_447; scaffold_448; scaffold_449; scaffold_45; scaffold_450; scaffold_451; scaffold_452; scaffold_454; scaffold_455; scaffold_456; scaffold_457; scaffold_458; scaffold_459; scaffold_460; scaffold_461; scaffold_462; scaffold_463; scaffold_464; scaffold_465; scaffold_466; scaffold_467; scaffold_468; scaffold_469; scaffold_47; scaffold_470; scaffold_471; scaffold_472; scaffold_473; scaffold_474; scaffold_475; scaffold_476; scaffold_478; scaffold_479; scaffold_48; scaffold_480; scaffold_481; scaffold_482; scaffold_483; scaffold_484; scaffold_485; scaffold_486; scaffold_487; scaffold_488; scaffold_489; scaffold_49; scaffold_490; scaffold_491; scaffold_492; scaffold_493; scaffold_494; scaffold_495; scaffold_496; scaffold_497; scaffold_498; scaffold_499; scaffold_50; scaffold_500; scaffold_501; scaffold_502; scaffold_503; scaffold_504; scaffold_505; scaffold_506; scaffold_507; scaffold_508; scaffold_509; scaffold_51; scaffold_510; scaffold_511; scaffold_512; scaffold_513; scaffold_515; scaffold_516; scaffold_517; scaffold_518; scaffold_519; scaffold_521; scaffold_522; scaffold_523; scaffold_524; scaffold_525; scaffold_526; scaffold_527; scaffold_528; scaffold_529; scaffold_53; scaffold_530; scaffold_531; scaffold_532; scaffold_533; scaffold_534; scaffold_535; scaffold_536; scaffold_537; scaffold_538; scaffold_54; scaffold_540; scaffold_541; scaffold_542; scaffold_543; scaffold_545; scaffold_546; scaffold_547; scaffold_548; scaffold_549; scaffold_55; scaffold_550; scaffold_552; scaffold_553; scaffold_555; scaffold_556; scaffold_557; scaffold_558; scaffold_559; scaffold_560; scaffold_561; scaffold_562; scaffold_563; scaffold_564; scaffold_565; scaffold_566; scaffold_567; scaffold_568; scaffold_569; scaffold_57; scaffold_570; scaffold_571; scaffold_572; scaffold_573; scaffold_574; scaffold_575; scaffold_576; scaffold_577; scaffold_578; scaffold_579; scaffold_580; scaffold_581; scaffold_582; scaffold_583; scaffold_585; scaffold_586; scaffold_587; scaffold_588; scaffold_589; scaffold_59; scaffold_590; scaffold_591; scaffold_592; scaffold_593; scaffold_594; scaffold_595; scaffold_596; scaffold_597; scaffold_598; scaffold_6; scaffold_60; scaffold_600; scaffold_601; scaffold_602; scaffold_603; scaffold_604; scaffold_605; scaffold_606; scaffold_607; scaffold_608; scaffold_609; scaffold_61; scaffold_610; scaffold_611; scaffold_612; scaffold_613; scaffold_614; scaffold_615; scaffold_616; scaffold_617; scaffold_618; scaffold_62; scaffold_620; scaffold_621; scaffold_622; scaffold_623; scaffold_624; scaffold_625; scaffold_626; scaffold_627; scaffold_629; scaffold_63; scaffold_630; scaffold_631; scaffold_632; scaffold_633; scaffold_634; scaffold_635; scaffold_636; scaffold_637; scaffold_638; scaffold_639; scaffold_64; scaffold_640; scaffold_641; scaffold_642; scaffold_643; scaffold_644; scaffold_645; scaffold_646; scaffold_647; scaffold_648; scaffold_649; scaffold_650; scaffold_651; scaffold_652; scaffold_653; scaffold_654; scaffold_655; scaffold_656; scaffold_657; scaffold_658; scaffold_659; scaffold_660; scaffold_662; scaffold_663; scaffold_664; scaffold_665; scaffold_666; scaffold_667; scaffold_668; scaffold_669; scaffold_67; scaffold_670; scaffold_671; scaffold_672; scaffold_673; scaffold_674; scaffold_675; scaffold_676; scaffold_677; scaffold_678; scaffold_679; scaffold_68; scaffold_680; scaffold_681; scaffold_682; scaffold_683; scaffold_685; scaffold_686; scaffold_687; scaffold_688; scaffold_689; scaffold_690; scaffold_691; scaffold_692; scaffold_693; scaffold_694; scaffold_695; scaffold_696; scaffold_697; scaffold_698; scaffold_699; scaffold_7; scaffold_70; scaffold_700; scaffold_701; scaffold_702; scaffold_703; scaffold_704; scaffold_705; scaffold_706; scaffold_708; scaffold_709; scaffold_71; scaffold_710; scaffold_711; scaffold_712; scaffold_713; scaffold_714; scaffold_715; scaffold_716; scaffold_717; scaffold_718; scaffold_719; scaffold_72; scaffold_720; scaffold_721; scaffold_722; scaffold_723; scaffold_724; scaffold_725; scaffold_726; scaffold_727; scaffold_728; scaffold_729; scaffold_73; scaffold_730; scaffold_731; scaffold_732; scaffold_733; scaffold_734; scaffold_735; scaffold_736; scaffold_737; scaffold_738; scaffold_739; scaffold_740; scaffold_741; scaffold_742; scaffold_743; scaffold_744; scaffold_745; scaffold_746; scaffold_747; scaffold_748; scaffold_749; scaffold_75; scaffold_750; scaffold_751; scaffold_752; scaffold_753; scaffold_754; scaffold_755; scaffold_756; scaffold_757; scaffold_758; scaffold_759; scaffold_76; scaffold_760; scaffold_761; scaffold_762; scaffold_763; scaffold_764; scaffold_765; scaffold_766; scaffold_767; scaffold_768; scaffold_769; scaffold_77; scaffold_770; scaffold_771; scaffold_772; scaffold_773; scaffold_774; scaffold_775; scaffold_776; scaffold_777; scaffold_778; scaffold_779; scaffold_78; scaffold_780; scaffold_781; scaffold_782; scaffold_783; scaffold_784; scaffold_785; scaffold_786; scaffold_787; scaffold_788; scaffold_789; scaffold_790; scaffold_791; scaffold_792; scaffold_793; scaffold_794; scaffold_795; scaffold_796; scaffold_797; scaffold_798; scaffold_799; scaffold_8; scaffold_800; scaffold_801; scaffold_803; scaffold_804; scaffold_805; scaffold_806; scaffold_807; scaffold_808; scaffold_809; scaffold_810; scaffold_811; scaffold_812; scaffold_813; scaffold_814; scaffold_815; scaffold_816; scaffold_817; scaffold_818; scaffold_819; scaffold_82; scaffold_820; scaffold_821; scaffold_822; scaffold_823; scaffold_824; scaffold_825; scaffold_826; scaffold_827; scaffold_828; scaffold_829; scaffold_83; scaffold_830; scaffold_831; scaffold_832; scaffold_833; scaffold_834; scaffold_835; scaffold_836; scaffold_837; scaffold_838; scaffold_839; scaffold_84; scaffold_840; scaffold_841; scaffold_842; scaffold_843; scaffold_844; scaffold_845; scaffold_846; scaffold_847; scaffold_848; scaffold_849; scaffold_85; scaffold_850; scaffold_851; scaffold_852; scaffold_853; scaffold_854; scaffold_855; scaffold_856; scaffold_857; scaffold_858; scaffold_859; scaffold_86; scaffold_860; scaffold_861; scaffold_862; scaffold_863; scaffold_864; scaffold_865; scaffold_866; scaffold_867; scaffold_868; scaffold_869; scaffold_87; scaffold_870; scaffold_871; scaffold_872; scaffold_873; scaffold_874; scaffold_875; scaffold_876; scaffold_877; scaffold_878; scaffold_879; scaffold_88; scaffold_880; scaffold_881; scaffold_882; scaffold_883; scaffold_885; scaffold_887; scaffold_888; scaffold_889; scaffold_89; scaffold_890; scaffold_891; scaffold_892; scaffold_893; scaffold_894; scaffold_895; scaffold_896; scaffold_897; scaffold_898; scaffold_899; scaffold_9; scaffold_90; scaffold_900; scaffold_901; scaffold_902; scaffold_903; scaffold_904; scaffold_905; scaffold_906; scaffold_907; scaffold_908; scaffold_909; scaffold_91; scaffold_910; scaffold_911; scaffold_912; scaffold_913; scaffold_914; scaffold_915; scaffold_916; scaffold_917; scaffold_918; scaffold_919; scaffold_92; scaffold_920; scaffold_921; scaffold_922; scaffold_923; scaffold_924; scaffold_925; scaffold_926; scaffold_927; scaffold_928; scaffold_929; scaffold_93; scaffold_930; scaffold_931; scaffold_932; scaffold_933; scaffold_934; scaffold_935; scaffold_936; scaffold_937; scaffold_938; scaffold_939; scaffold_94; scaffold_940; scaffold_941; scaffold_942; scaffold_943; scaffold_944; scaffold_945; scaffold_946; scaffold_947; scaffold_948; scaffold_949; scaffold_95; scaffold_950; scaffold_951; scaffold_952; scaffold_953; scaffold_954; scaffold_955; scaffold_956; scaffold_957; scaffold_958; scaffold_959; scaffold_96; scaffold_960; scaffold_961; scaffold_962; scaffold_963; scaffold_964; scaffold_965; scaffold_966; scaffold_967; scaffold_968; scaffold_969; scaffold_970; scaffold_971; scaffold_972; scaffold_973; scaffold_974; scaffold_975; scaffold_976; scaffold_977; scaffold_978; scaffold_979; scaffold_980; scaffold_981; scaffold_982; scaffold_983; scaffold_984; scaffold_985; scaffold_986; scaffold_987; scaffold_988; scaffold_989; scaffold_99; scaffold_990; scaffold_991; scaffold_992; scaffold_993; scaffold_994; scaffold_995; scaffold_996; scaffold_997; scaffold_998; scaffold_999

Compact view

scaffold_100 - Region 1 - NRPS,indole

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Location: 70,928 - 111,449 nt. (total: 40,522 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
indole: (indsynth or dmat or indole_PTase)

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 70927 - 111449:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

960005

AMP-binding (29..407): X

nrpys: Val, Leu, Ile, Abu, Ival

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAGPYGCCAK
Nearest Stachelhaus code(s):: Phe DAGALGACAK (68% 8� match); Trp DAGIVGACAK (56% 8� match)
Stachelhaus code match:: 70% (weak)

AMP-binding (1061..1444): X

nrpys: 6-clTrp

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAAMLGGVGK
Nearest Stachelhaus code(s):: 6-clTrp DAAMCGGVAK (44% 8� match)
Stachelhaus code match:: 80% (moderate)

scaffold_102 - Region 1 - indole

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Location: 20,498 - 51,700 nt. (total: 31,203 nt) Show pHMM detection rules used

indole: (indsynth or dmat or indole_PTase)

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core biosynthetic genes

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scaffold_106 - Region 1 - terpene

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Location: 81,859 - 106,923 nt. (total: 25,065 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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No matches found.

scaffold_111 - Region 1 - T1PKS

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Location: 18,156 - 84,943 nt. (total: 66,788 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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core biosynthetic genes

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 18155 - 84943:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1051504

PKS_AT (904..1203): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 62.5%; inactive: 62.5%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 93.2
Methylmalonyl-CoA: 64.6
Methoxymalonyl-CoA: 59.0
inactive: 44.4
Propionyl-CoA: 37.0
Isobutyryl-CoA: 26.2
2-Methylbutyryl-CoA: 19.5
Ethylmalonyl-CoA: 18.3
CHC-CoA: 15.4
Benzoyl-CoA: 15.3
Acetyl-CoA: 11.7
3-Methylbutyryl-CoA: 11.7
fatty_acid: 11.6
trans-1,2-CPDA: 9.2

scaffold_112 - Region 1 - NRPS,T1PKS

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Location: 46,470 - 103,161 nt. (total: 56,692 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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core biosynthetic genes

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 46469 - 103161:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1177116

PKS_AT (551..866): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 66.7%; Ethylmalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 87.8
Methoxymalonyl-CoA: 73.7
Ethylmalonyl-CoA: 64.6
Isobutyryl-CoA: 51.4
Malonyl-CoA: 32.3
Benzoyl-CoA: 31.5
trans-1,2-CPDA: 30.7
Propionyl-CoA: 29.4
fatty_acid: 28.1
2-Methylbutyryl-CoA: 27.6
3-Methylbutyryl-CoA: 17.3
CHC-CoA: 16.5
inactive: 11.1
Acetyl-CoA: 3.3

AMP-binding (3028..3431): X

nrpys: Orn, Lys, Arg

SVM prediction details:

Predicted physicochemical class:: hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
Large clusters prediction:: Long positively charged side chain (Orn, Lys, Arg)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DLAKFGCISK
Nearest Stachelhaus code(s):: MalAc NHDKFGSISK (59% 8� match); Hty DLAFTGCVTK (56% 8� match); 3Me-Glu DLGKTGVINK (53% 8� match); Asp DLTKVGHIGK (50% 8� match); Asn DLTKVGDVSK (47% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_1153 - Region 1 - fungal-RiPP-like

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Location: 1 - 4,554 nt. (total: 4,554 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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core biosynthetic genes

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		NT	AA		NT	AA

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No matches found.

scaffold_12 - Region 1 - T1PKS

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Location: 1 - 64,544 nt. (total: 64,544 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

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No matches found.

Module view

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 64544:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

987156

PKS_AT (603..929): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 66.7%; Ethylmalonyl-CoA: 58.3%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 80.3
Methylmalonyl-CoA: 75.5
Malonyl-CoA: 66.5
Isobutyryl-CoA: 42.2
Ethylmalonyl-CoA: 37.0
trans-1,2-CPDA: 29.8
inactive: 27.7
CHC-CoA: 27.1
fatty_acid: 25.6
2-Methylbutyryl-CoA: 21.6
3-Methylbutyryl-CoA: 18.6
Propionyl-CoA: 17.9
Benzoyl-CoA: 14.3
Acetyl-CoA: 6.6

scaffold_121 - Region 1 - terpene

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Location: 1 - 31,011 nt. (total: 31,011 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

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No matches found.

scaffold_13 - Region 1 - T1PKS

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Location: 192,734 - 261,711 nt. (total: 68,978 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 192733 - 261711:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1191029

PKS_AT (531..843): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 62.5%; Methoxymalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 74.1
Methoxymalonyl-CoA: 68.0
Ethylmalonyl-CoA: 43.9
Isobutyryl-CoA: 37.9
Malonyl-CoA: 31.9
Benzoyl-CoA: 28.1
trans-1,2-CPDA: 26.9
Propionyl-CoA: 20.1
fatty_acid: 19.9
3-Methylbutyryl-CoA: 14.7
CHC-CoA: 14.1
2-Methylbutyryl-CoA: 12.5
inactive: 0.0
Acetyl-CoA: 0.0

scaffold_132 - Region 1 - NRPS

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Location: 16,950 - 93,835 nt. (total: 76,886 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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Module view

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 16949 - 93835:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - Ala) + (Pro)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1191318

Search NORINE for peptide: strict or relaxed

AMP-binding (473..879): Pro

nrpys: Pro

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Cyclic aliphatic chain (polar NH2 group) (Pro, Hpr)
Small clusters prediction:: pro (Pro)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DIQSAVGAIK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

962194

AMP-binding (38..458): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: GLGYVGGVIK
Nearest Stachelhaus code(s):: nohBza GLGLVGAIIK (35% 8� match); Abu DLGYVAGVFK (29% 8� match)
Stachelhaus code match:: 70% (weak)

1177642

Search NORINE for peptide: strict or relaxed

AMP-binding (882..1276): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DISNVAAILK
Nearest Stachelhaus code(s):: bOH-Tyr DTSKVAAICK (56% 8� match)
Stachelhaus code match:: 70% (weak)

AMP-binding (1970..2372): Ala

nrpys: Ala

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: ala (Ala)

Stachelhaus prediction details:

Stachelhaus sequence:: DVQGVNSINK
Nearest Stachelhaus code(s):: Gln DVQIVGGIHK (76% 8� match); bOH-Gln DAQNIASINK (68% 8� match); Arg DVENVGAINK (41% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_140 - Region 1 - fungal-RiPP-like,terpene

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Location: 1 - 85,696 nt. (total: 85,696 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328
terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

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scaffold_148 - Region 1 - fungal-RiPP-like

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Location: 3,349 - 89,133 nt. (total: 85,785 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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scaffold_154 - Region 1 - indole

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Location: 1 - 25,270 nt. (total: 25,270 nt) Show pHMM detection rules used

Region on contig edge.

indole: (indsynth or dmat or indole_PTase)

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scaffold_156 - Region 1 - T1PKS

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Location: 32,496 - 86,917 nt. (total: 54,422 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 32495 - 86917:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1140935

PKS_AT (531..825): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 58.3%; inactive: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 55.4
inactive: 50.4
Methoxymalonyl-CoA: 35.7
Methylmalonyl-CoA: 35.4
Propionyl-CoA: 16.3
CHC-CoA: 10.9
Benzoyl-CoA: 10.1
2-Methylbutyryl-CoA: 10.0
Ethylmalonyl-CoA: 9.9
fatty_acid: 9.5
trans-1,2-CPDA: 0.0
Isobutyryl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

scaffold_17 - Region 1 - T1PKS

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Location: 18,966 - 87,522 nt. (total: 68,557 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 18965 - 87522:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1136189

PKS_AT (580..905): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 75.0%; Ethylmalonyl-CoA: 66.7%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 64.5
Methoxymalonyl-CoA: 62.2
Malonyl-CoA: 55.5
Ethylmalonyl-CoA: 36.9
Isobutyryl-CoA: 33.8
Propionyl-CoA: 32.2
inactive: 26.0
fatty_acid: 20.7
Benzoyl-CoA: 18.7
Acetyl-CoA: 15.0
CHC-CoA: 11.2
2-Methylbutyryl-CoA: 8.8
trans-1,2-CPDA: 8.0
3-Methylbutyryl-CoA: -2.9

scaffold_17 - Region 2 - fungal-RiPP-like

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Location: 109,529 - 202,047 nt. (total: 92,519 nt) Show pHMM detection rules used

fungal-RiPP-like: DUF3328

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scaffold_191 - Region 1 - NRPS,T1PKS

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Location: 1 - 70,526 nt. (total: 70,526 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: cds(Condensation and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 70526:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (pk - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1178959

PKS_AT (562..877): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 66.7%; Methoxymalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 73.0
Methoxymalonyl-CoA: 64.7
Ethylmalonyl-CoA: 51.7
Malonyl-CoA: 35.8
Propionyl-CoA: 27.9
Isobutyryl-CoA: 27.4
Benzoyl-CoA: 24.9
3-Methylbutyryl-CoA: 22.0
2-Methylbutyryl-CoA: 21.6
trans-1,2-CPDA: 16.2
fatty_acid: 15.3
inactive: 13.5
CHC-CoA: 10.1
Acetyl-CoA: 9.1

AMP-binding (3070..3474): X

nrpys: Orn, Lys, Arg

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Long positively charged side chain (Orn, Lys, Arg)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DMAGLGCLCK
Nearest Stachelhaus code(s):: Hpg DAAHLGLLCK (50% 8� match)
Stachelhaus code match:: 70% (weak)

184801

PKS_AT (538..840): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 62.5%; Propionyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 90.2
Methoxymalonyl-CoA: 70.4
Isobutyryl-CoA: 62.4
Ethylmalonyl-CoA: 57.8
Propionyl-CoA: 45.1
Malonyl-CoA: 45.1
Benzoyl-CoA: 31.1
2-Methylbutyryl-CoA: 28.0
trans-1,2-CPDA: 21.8
fatty_acid: 20.8
Acetyl-CoA: 16.8
CHC-CoA: 14.6
3-Methylbutyryl-CoA: 14.6
inactive: 0.0

scaffold_192 - Region 1 - fungal-RiPP-like

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Location: 1 - 57,734 nt. (total: 57,734 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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scaffold_20 - Region 1 - T1PKS

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Location: 1 - 61,835 nt. (total: 61,835 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 61835:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1068178

PKS_AT (919..1213): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 62.5%; Ethylmalonyl-CoA: 54.2%; inactive: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 65.9
Methoxymalonyl-CoA: 60.6
Methylmalonyl-CoA: 54.8
inactive: 48.4
Ethylmalonyl-CoA: 30.8
Propionyl-CoA: 23.0
CHC-CoA: 22.1
fatty_acid: 21.3
2-Methylbutyryl-CoA: 16.7
trans-1,2-CPDA: 14.4
3-Methylbutyryl-CoA: 13.5
Isobutyryl-CoA: 13.0
Acetyl-CoA: 12.5
Benzoyl-CoA: 9.0

1136368

AMP-binding (10..313): X

nrpys: (unknown)

SVM prediction details:

NOTE: uncertain match

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: -LNAFAV--K
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

scaffold_202 - Region 1 - fungal-RiPP-like

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Location: 23,311 - 74,457 nt. (total: 51,147 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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scaffold_203 - Region 1 - T1PKS,terpene

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Location: 1 - 74,452 nt. (total: 74,452 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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Predicted core structure(s)

For candidate cluster 1, location 0 - 74452:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 0 - 57828:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

966149

PKS_AT (610..914): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 66.7%; Methoxymalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 91.2
Methoxymalonyl-CoA: 79.7
Malonyl-CoA: 56.3
Isobutyryl-CoA: 54.2
Propionyl-CoA: 41.5
Benzoyl-CoA: 38.5
trans-1,2-CPDA: 33.0
fatty_acid: 20.9
CHC-CoA: 17.3
2-Methylbutyryl-CoA: 16.0
inactive: 12.2
3-Methylbutyryl-CoA: 10.8
Acetyl-CoA: 8.4
Ethylmalonyl-CoA: -2.2

scaffold_205 - Region 1 - fungal-RiPP-like

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Location: 1 - 74,035 nt. (total: 74,035 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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scaffold_206 - Region 1 - NRPS,T1PKS

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Location: 1 - 42,860 nt. (total: 42,860 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: cds(Condensation and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 42860:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1031308

PKS_AT (555..870): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methoxymalonyl-CoA: 62.5%; Methylmalonyl-CoA: 62.5%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 95.7
Methoxymalonyl-CoA: 75.9
Ethylmalonyl-CoA: 62.3
trans-1,2-CPDA: 44.0
Isobutyryl-CoA: 42.2
Malonyl-CoA: 39.0
Propionyl-CoA: 37.3
Benzoyl-CoA: 35.6
2-Methylbutyryl-CoA: 21.3
fatty_acid: 19.8
CHC-CoA: 18.7
Acetyl-CoA: 12.0
3-Methylbutyryl-CoA: 10.1
inactive: 0.0

AMP-binding (3024..3423): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVTYLAVCGK
Nearest Stachelhaus code(s):: Ala DVFSLAVVYK (53% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_207 - Region 1 - T1PKS

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Location: 25,450 - 73,897 nt. (total: 48,448 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 25449 - 73897:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

212103

PKS_AT (914..1206): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 58.3%; inactive: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 54.2
Methoxymalonyl-CoA: 50.2
inactive: 46.2
Methylmalonyl-CoA: 42.2
fatty_acid: 30.9
Ethylmalonyl-CoA: 22.6
CHC-CoA: 19.6
Propionyl-CoA: 18.5
trans-1,2-CPDA: 17.3
2-Methylbutyryl-CoA: 17.2
Benzoyl-CoA: 14.8
Isobutyryl-CoA: 14.6
3-Methylbutyryl-CoA: 13.2
Acetyl-CoA: 11.1

scaffold_209 - Region 1 - fungal-RiPP-like

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Location: 1 - 73,557 nt. (total: 73,557 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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scaffold_21 - Region 1 - NRPS-like

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Location: 34,202 - 97,629 nt. (total: 63,428 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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No matches found.

scaffold_212 - Region 1 - T1PKS

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Location: 1 - 59,825 nt. (total: 59,825 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 59825:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1179355

PKS_AT (603..922): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 58.3%; Ethylmalonyl-CoA: 54.2%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 81.9
Methoxymalonyl-CoA: 77.6
Malonyl-CoA: 65.0
Ethylmalonyl-CoA: 50.5
Isobutyryl-CoA: 31.4
trans-1,2-CPDA: 24.6
fatty_acid: 24.2
Propionyl-CoA: 17.8
Benzoyl-CoA: 17.1
3-Methylbutyryl-CoA: 14.5
inactive: 13.0
CHC-CoA: 11.5
2-Methylbutyryl-CoA: 8.7
Acetyl-CoA: 6.6

scaffold_22 - Region 1 - indole

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Location: 184,140 - 215,243 nt. (total: 31,104 nt) Show pHMM detection rules used

indole: (indsynth or dmat or indole_PTase)

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scaffold_226 - Region 1 - fungal-RiPP-like

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Location: 1 - 70,212 nt. (total: 70,212 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

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scaffold_228 - Region 1 - fungal-RiPP-like

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Location: 1 - 69,813 nt. (total: 69,813 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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scaffold_25 - Region 1 - T1PKS

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Location: 102,944 - 170,865 nt. (total: 67,922 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 102943 - 170865:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1200957

PKS_AT (891..1181): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 54.2%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 45.7
Malonyl-CoA: 40.5
Methylmalonyl-CoA: 34.2
trans-1,2-CPDA: 16.1
CHC-CoA: 15.3
inactive: 15.2
Ethylmalonyl-CoA: 14.4
Propionyl-CoA: 14.1
2-Methylbutyryl-CoA: 9.4
fatty_acid: 9.2
Benzoyl-CoA: 9.2
Isobutyryl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

scaffold_250 - Region 1 - T1PKS

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Location: 16,088 - 65,610 nt. (total: 49,523 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 16087 - 65610:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1180085

PKS_AT (637..951): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 62.5%; Ethylmalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 71.4
Methoxymalonyl-CoA: 64.6
Malonyl-CoA: 63.7
Propionyl-CoA: 38.2
Ethylmalonyl-CoA: 29.6
inactive: 19.5
CHC-CoA: 16.7
Benzoyl-CoA: 13.7
Isobutyryl-CoA: 9.6
2-Methylbutyryl-CoA: 4.0
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0
Acetyl-CoA: -1.5

scaffold_26 - Region 1 - fungal-RiPP-like

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Location: 173,776 - 224,780 nt. (total: 51,005 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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scaffold_260 - Region 1 - T1PKS

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Location: 1 - 54,930 nt. (total: 54,930 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 54930:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1180249

PKS_AT (907..1205): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 58.3%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 82.4
inactive: 45.9
Methoxymalonyl-CoA: 34.1
Methylmalonyl-CoA: 28.3
fatty_acid: 20.7
Propionyl-CoA: 11.6
2-Methylbutyryl-CoA: 10.5
Isobutyryl-CoA: 9.4
Benzoyl-CoA: 9.2
trans-1,2-CPDA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

scaffold_271 - Region 1 - T1PKS

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Location: 19,279 - 62,581 nt. (total: 43,303 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 19278 - 62581:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

297247

PKS_AT (922..1218): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 103.8
Methylmalonyl-CoA: 61.1
Methoxymalonyl-CoA: 57.4
inactive: 46.3
Propionyl-CoA: 34.8
Isobutyryl-CoA: 32.2
2-Methylbutyryl-CoA: 29.7
Ethylmalonyl-CoA: 17.9
Benzoyl-CoA: 16.0
CHC-CoA: 14.3
3-Methylbutyryl-CoA: 12.1
fatty_acid: 10.7
trans-1,2-CPDA: 9.3
Acetyl-CoA: 8.1

scaffold_274 - Region 1 - fungal-RiPP-like

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Location: 8,098 - 61,712 nt. (total: 53,615 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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scaffold_276 - Region 1 - T1PKS

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Location: 641 - 61,509 nt. (total: 60,869 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 640 - 61509:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1180534

PKS_AT (924..1219): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 54.2%

minowa: inactive

Prediction, score:

inactive: 52.7
Malonyl-CoA: 52.3
Methoxymalonyl-CoA: 50.0
Methylmalonyl-CoA: 43.1
Ethylmalonyl-CoA: 28.2
Propionyl-CoA: 28.0
CHC-CoA: 25.5
2-Methylbutyryl-CoA: 19.1
trans-1,2-CPDA: 17.4
Isobutyryl-CoA: 15.9
Benzoyl-CoA: 14.5
3-Methylbutyryl-CoA: 12.5
Acetyl-CoA: 12.3
fatty_acid: 11.7

scaffold_287 - Region 1 - fungal-RiPP-like

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Location: 1 - 47,473 nt. (total: 47,473 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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scaffold_295 - Region 1 - NRPS-like,T1PKS

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Location: 6,608 - 58,006 nt. (total: 51,399 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 6607 - 58006:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X) + (mal)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 13580 - 58006:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X) + (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

327684

PKS_AT (907..1209): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 62.5%; Propionyl-CoA: 54.2%; inactive: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 72.8
Methoxymalonyl-CoA: 61.7
Methylmalonyl-CoA: 60.2
inactive: 48.4
Isobutyryl-CoA: 29.8
Benzoyl-CoA: 25.9
Ethylmalonyl-CoA: 22.0
Propionyl-CoA: 15.5
fatty_acid: 13.3
2-Methylbutyryl-CoA: 9.6
trans-1,2-CPDA: 9.5
CHC-CoA: 9.4
Acetyl-CoA: 4.3
3-Methylbutyryl-CoA: -1.8

1003871

AMP-binding (106..434): X

nrpys: Gly, Ala, Val, Leu, Ile, Abu, Ival

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: GFLMAGHALK
Nearest Stachelhaus code(s):: meOrs GFVMLGHLGK (62% 8� match); Val DALFAGGALK (35% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_313 - Region 1 - NRPS

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Location: 1 - 55,637 nt. (total: 55,637 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 55637:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Ala)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1143862

Search NORINE for peptide: strict or relaxed

AMP-binding (61..462): Ala

nrpys: Ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: Tiny, hydrophilic, transition to aliphatic (Gly, Ala)
Single AA prediction:: ala (Ala)

Stachelhaus prediction details:

Stachelhaus sequence:: AMFACSGPIK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

scaffold_318 - Region 1 - fungal-RiPP-like

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Location: 1 - 55,000 nt. (total: 55,000 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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scaffold_323 - Region 1 - T1PKS

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Location: 1 - 53,573 nt. (total: 53,573 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 53573:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1144005

AMP-binding (48..492): X

nrpys: Val, Leu, Ile, Abu, Ival

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: GSGYISCPVK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

362475

PKS_AT (530..843): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; Methylmalonyl-CoA: 62.5%; Isobutyryl-CoA: 62.5%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 93.2
Methoxymalonyl-CoA: 88.1
Malonyl-CoA: 69.4
Isobutyryl-CoA: 66.5
Propionyl-CoA: 48.5
Ethylmalonyl-CoA: 45.7
Benzoyl-CoA: 40.5
inactive: 38.9
2-Methylbutyryl-CoA: 31.3
3-Methylbutyryl-CoA: 22.2
trans-1,2-CPDA: 21.7
CHC-CoA: 13.8
Acetyl-CoA: 12.6
fatty_acid: 12.5

scaffold_335 - Region 1 - fungal-RiPP-like

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Location: 1 - 52,465 nt. (total: 52,465 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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scaffold_338 - Region 1 - fungal-RiPP-like

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Location: 1 - 52,359 nt. (total: 52,359 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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scaffold_339 - Region 1 - terpene

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Location: 1 - 18,215 nt. (total: 18,215 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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scaffold_340 - Region 1 - NRPS-like

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Location: 1 - 38,762 nt. (total: 38,762 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 38762:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

972191

AMP-binding (45..364): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: -VFYISYQIK
Nearest Stachelhaus code(s):: Pro DVQYISGVIK (38% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_346 - Region 1 - T1PKS

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Location: 2,308 - 51,408 nt. (total: 49,101 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 2307 - 51408:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1207346

PKS_AT (917..1207): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 107.0
Methoxymalonyl-CoA: 63.7
Methylmalonyl-CoA: 56.8
inactive: 47.1
Propionyl-CoA: 34.4
Ethylmalonyl-CoA: 26.6
2-Methylbutyryl-CoA: 22.8
fatty_acid: 22.0
CHC-CoA: 19.8
3-Methylbutyryl-CoA: 17.0
Isobutyryl-CoA: 16.9
Benzoyl-CoA: 15.3
Acetyl-CoA: 14.3
trans-1,2-CPDA: 9.8

scaffold_348 - Region 1 - fungal-RiPP-like

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Location: 1 - 51,026 nt. (total: 51,026 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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scaffold_37 - Region 1 - NRPS-like

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Location: 104,237 - 167,638 nt. (total: 63,402 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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NRPS/PKS monomers

NRPS/PKS monomer predictions

1174475

AMP-binding (36..426): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: ---VMAFILK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

scaffold_373 - Region 1 - terpene

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Location: 18,292 - 48,016 nt. (total: 29,725 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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scaffold_379 - Region 1 - T1PKS

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Location: 1 - 47,515 nt. (total: 47,515 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 47515:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

418689

PKS_AT (931..1226): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 54.2%; Isobutyryl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 96.4
Methylmalonyl-CoA: 65.4
Methoxymalonyl-CoA: 56.8
inactive: 54.3
Propionyl-CoA: 50.5
2-Methylbutyryl-CoA: 34.5
CHC-CoA: 21.1
Ethylmalonyl-CoA: 18.3
Benzoyl-CoA: 17.8
Isobutyryl-CoA: 17.2
fatty_acid: 15.4
Acetyl-CoA: 14.6
trans-1,2-CPDA: 11.6
3-Methylbutyryl-CoA: 10.3

scaffold_382 - Region 1 - T1PKS

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Location: 42 - 47,316 nt. (total: 47,275 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 41 - 47316:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1144783

PKS_AT (424..697): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 70.8%; Methylmalonyl-CoA: 54.2%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 51.4
Methoxymalonyl-CoA: 43.6
Malonyl-CoA: 20.4
Isobutyryl-CoA: 20.2
Ethylmalonyl-CoA: 18.1
Propionyl-CoA: 17.9
fatty_acid: 16.0
CHC-CoA: 14.1
2-Methylbutyryl-CoA: 10.7
trans-1,2-CPDA: 10.5
Benzoyl-CoA: 10.4
3-Methylbutyryl-CoA: 5.0
inactive: 0.0
Acetyl-CoA: 0.0

scaffold_399 - Region 1 - terpene

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Location: 28,079 - 44,864 nt. (total: 16,786 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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scaffold_41 - Region 1 - terpene

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Location: 28,914 - 60,939 nt. (total: 32,026 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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scaffold_410 - Region 1 - terpene

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Location: 22,983 - 43,669 nt. (total: 20,687 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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scaffold_413 - Region 1 - indole

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Location: 21,205 - 43,579 nt. (total: 22,375 nt) Show pHMM detection rules used

Region on contig edge.

indole: (indsynth or dmat or indole_PTase)

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scaffold_419 - Region 1 - NRPS-like

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Location: 3,502 - 43,022 nt. (total: 39,521 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 3501 - 43022:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1211393

AMP-binding (33..455): X

nrpys: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: VASFIGGAGK
Nearest Stachelhaus code(s):: Ppa VATFIGGAGK (91% 8� match)
Stachelhaus code match:: 90% (moderate)

scaffold_428 - Region 1 - NRPS

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Location: 1 - 42,025 nt. (total: 42,025 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 42025:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

474652

AMP-binding (57..442): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: SARESGAQLK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

AMP-binding (1092..1481): X

nrpys: Gly, Ala, Val, Leu, Ile, Abu, Ival

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAYMNCGILK
Nearest Stachelhaus code(s):: Val DAWMFAAILK (53% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_44 - Region 1 - NRPS-like

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Location: 17,789 - 81,142 nt. (total: 63,354 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 17788 - 81142:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1021837

AMP-binding (55..366): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: IPYFIAFEVK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

scaffold_453 - Region 1 - T1PKS

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Location: 1,011 - 40,117 nt. (total: 39,107 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 1010 - 40117:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

497100

PKS_AT (940..1238): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; inactive: 62.5%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 101.2
inactive: 77.1
Methylmalonyl-CoA: 58.9
Methoxymalonyl-CoA: 48.3
Propionyl-CoA: 41.3
Benzoyl-CoA: 22.3
fatty_acid: 21.7
2-Methylbutyryl-CoA: 20.7
Isobutyryl-CoA: 18.6
CHC-CoA: 18.4
Ethylmalonyl-CoA: 17.8
trans-1,2-CPDA: 15.1
Acetyl-CoA: 12.0
3-Methylbutyryl-CoA: 9.2

scaffold_46 - Region 1 - terpene

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Location: 41,088 - 72,314 nt. (total: 31,227 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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scaffold_477 - Region 1 - NRPS-like

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Location: 3,642 - 37,996 nt. (total: 34,355 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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No matches found.

NRPS/PKS monomers

NRPS/PKS monomer predictions

1183167

AMP-binding (263..657): X

nrpys: Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVMHSGCACK
Nearest Stachelhaus code(s):: Glu DVTHSGSVTK (62% 8� match); Leu DAMLVGAACK (50% 8� match); Hpg DVYHLGLLCK (44% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_5 - Region 1 - fungal-RiPP-like

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Location: 12,626 - 103,770 nt. (total: 91,145 nt) Show pHMM detection rules used

fungal-RiPP-like: DUF3328

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scaffold_514 - Region 1 - NRPS-like

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Location: 1 - 35,174 nt. (total: 35,174 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 35174:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1240717

AMP-binding (72..485): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: IALISSTLLK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

scaffold_52 - Region 1 - T1PKS

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Location: 42,540 - 110,798 nt. (total: 68,259 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 42539 - 110798:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1216372

PKS_AT (579..901): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 62.5%; Propionyl-CoA: 58.3%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 83.5
Methylmalonyl-CoA: 80.3
Malonyl-CoA: 77.4
Isobutyryl-CoA: 49.1
Ethylmalonyl-CoA: 40.9
Propionyl-CoA: 31.6
3-Methylbutyryl-CoA: 30.8
Benzoyl-CoA: 26.2
inactive: 25.6
trans-1,2-CPDA: 23.4
fatty_acid: 17.9
CHC-CoA: 13.0
Acetyl-CoA: 12.2
2-Methylbutyryl-CoA: 5.7

scaffold_520 - Region 1 - T1PKS

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Location: 1 - 34,611 nt. (total: 34,611 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 34611:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

560229

PKS_AT (597..889): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 70.8%; CE-Malonyl-CoA: 62.5%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 106.5
Methoxymalonyl-CoA: 90.1
Ethylmalonyl-CoA: 80.2
Malonyl-CoA: 59.4
Isobutyryl-CoA: 58.4
Propionyl-CoA: 46.1
Acetyl-CoA: 43.4
2-Methylbutyryl-CoA: 43.4
trans-1,2-CPDA: 35.7
Benzoyl-CoA: 33.5
3-Methylbutyryl-CoA: 29.7
fatty_acid: 24.8
CHC-CoA: 14.1
inactive: 0.0

scaffold_539 - Region 1 - T1PKS

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Location: 1 - 33,183 nt. (total: 33,183 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 33183:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

977897

PKS_AT (910..1200): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 111.4
inactive: 78.0
Methoxymalonyl-CoA: 57.3
Methylmalonyl-CoA: 48.5
Propionyl-CoA: 29.5
fatty_acid: 13.6
Acetyl-CoA: 13.2
2-Methylbutyryl-CoA: 12.3
Ethylmalonyl-CoA: 9.8
trans-1,2-CPDA: 9.1
Isobutyryl-CoA: 8.1
CHC-CoA: 7.2
Benzoyl-CoA: 7.2
3-Methylbutyryl-CoA: 0.0

scaffold_544 - Region 1 - terpene

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Location: 10,912 - 32,990 nt. (total: 22,079 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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scaffold_551 - Region 1 - T1PKS

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Location: 1 - 32,480 nt. (total: 32,480 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 32480:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1146517

PKS_AT (552..886): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 66.7%; Ethylmalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 60.3
Methoxymalonyl-CoA: 60.2
Isobutyryl-CoA: 29.5
Malonyl-CoA: 27.0
Ethylmalonyl-CoA: 24.0
Propionyl-CoA: 23.4
fatty_acid: 19.7
2-Methylbutyryl-CoA: 14.5
Benzoyl-CoA: 14.4
inactive: 13.1
CHC-CoA: 10.1
trans-1,2-CPDA: 7.5
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

scaffold_554 - Region 1 - NRPS-like

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Location: 1 - 32,119 nt. (total: 32,119 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 32119:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1217714

AMP-binding (45..378): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: HGACGGRFLK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

scaffold_56 - Region 1 - NRPS,T1PKS

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Location: 1 - 91,199 nt. (total: 91,199 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 91199:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (X - Leu - Val - Tyr - X)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 0 - 56135:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (X - Leu - Val - Tyr - X)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 13676 - 91199:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (X - Leu - Val - Tyr - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

587354

PKS_AT (522..825): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 62.5%; Propionyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 83.3
Methoxymalonyl-CoA: 63.6
Propionyl-CoA: 51.8
Malonyl-CoA: 41.7
fatty_acid: 38.5
Isobutyryl-CoA: 32.7
Benzoyl-CoA: 26.7
2-Methylbutyryl-CoA: 25.0
trans-1,2-CPDA: 23.5
CHC-CoA: 21.1
3-Methylbutyryl-CoA: 10.5
Acetyl-CoA: 5.7
inactive: 0.0
Ethylmalonyl-CoA: -4.2

1077609

Search NORINE for peptide: strict or relaxed

AMP-binding (317..718): X

nrpys: Gly, Ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Tiny, hydrophilic, transition to aliphatic (Gly, Ala)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DIGCVCAILK
Nearest Stachelhaus code(s):: Leu DIHFVGAIAK (59% 8� match); Hpg DIWHVGAITK (47% 8� match)
Stachelhaus code match:: 60% (weak)

AMP-binding (1401..1812): Leu

nrpys: Leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DILLLGAVVK
Nearest Stachelhaus code(s):: Leu DALLLGAVVK (59% 8� match)
Stachelhaus code match:: 90% (moderate)

AMP-binding (2501..2899): Val

nrpys: Val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DALFVGGIFK
Nearest Stachelhaus code(s):: Val DAMFVGGVFK (56% 8� match)
Stachelhaus code match:: 80% (moderate)

AMP-binding (3577..3971): Tyr

nrpys: Tyr

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DALALGMVVK
Nearest Stachelhaus code(s):: Tyr DALAVGEVVK (50% 8� match)
Stachelhaus code match:: 80% (moderate)

AMP-binding (4667..5062): X

nrpys: Val, Leu, Ile, Abu, Ival

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: GAAFIGGTIK
Nearest Stachelhaus code(s):: Val DALFIGGTFK (44% 8� match); Leu or Ile DALFIGGTFK (44% 8� match)
Stachelhaus code match:: 70% (weak)

scaffold_58 - Region 1 - NRPS-like,T1PKS

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Location: 1 - 66,961 nt. (total: 66,961 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 66961:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (redmal) + (Gly)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 0 - 61558:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (redmal) + (Gly)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 3408 - 66961:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (redmal) + (Gly)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1077978

PKS_AT (432..745): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 62.5%; Isobutyryl-CoA: 54.2%

minowa: Isobutyryl-CoA

Prediction, score:

Isobutyryl-CoA: 81.8
Methylmalonyl-CoA: 80.2
Methoxymalonyl-CoA: 77.2
Malonyl-CoA: 62.6
Ethylmalonyl-CoA: 39.4
Propionyl-CoA: 38.0
Benzoyl-CoA: 36.6
inactive: 35.1
3-Methylbutyryl-CoA: 33.6
trans-1,2-CPDA: 27.4
2-Methylbutyryl-CoA: 25.1
fatty_acid: 14.1
Acetyl-CoA: 12.7
CHC-CoA: 8.8

600073

Search NORINE for peptide: strict or relaxed

AMP-binding (117..495): Gly

nrpys: Gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DLVYFATVQK
Nearest Stachelhaus code(s):: Gly DLVYFATVQK (85% 8� match)
Stachelhaus code match:: 100% (strong)

scaffold_584 - Region 1 - terpene

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Location: 2,932 - 30,175 nt. (total: 27,244 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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scaffold_599 - Region 1 - NRPS-like

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Location: 1 - 29,213 nt. (total: 29,213 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 29213:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1184272

AMP-binding (28..430): X

nrpys: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: VATFPGAAGK
Nearest Stachelhaus code(s):: Ppa VATFIGGAGK (74% 8� match)
Stachelhaus code match:: 80% (moderate)

scaffold_619 - Region 1 - NRPS-like

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Location: 1 - 27,441 nt. (total: 27,441 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 27441:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Aad)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1125005

Search NORINE for peptide: strict or relaxed

AMP-binding (268..738): Aad

nrpys: Aad

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DPRHFVMRAK
Nearest Stachelhaus code(s):: Aad DPRHFVMRAK (100% 8� match)
Stachelhaus code match:: 100% (strong)

scaffold_628 - Region 1 - NRP-metallophore,NRPS

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Location: 1 - 26,580 nt. (total: 26,580 nt) Show pHMM detection rules used

Region on contig edge.

NRP-metallophore: (VibH_like or Cy_tandem or (cds(Condensation and AMP-binding) and ((IBH_Asp and not SBH_Asp) or IBH_His or TBH_Asp or CyanoBH_Asp1 or CyanoBH_Asp2 or IPL or SalSyn or (EntA and EntC) or (GrbD and GrbE) or (FbnL and FbnM) or PvdO or PvdP or (Orn_monoox and not (KtzT or MetRS-like)) or Lys_monoox or VbsL)))
NRPS: cds(Condensation and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 26580:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1241529

AMP-binding (188..583): X

nrpys: Phe, Tyr, diOH-Bz, Ph-Gly, bOH-Tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic (Phe, Tyr, diOH-Bz, Ph-Gly, bOH-Tyr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVFELIMIHK
Nearest Stachelhaus code(s):: Orn DVSELGTINK (59% 8� match); Dab DVGELSSIDK (44% 8� match); Ser DLFNLGLIHK (38% 8� match)
Stachelhaus code match:: 60% (weak)

AMP-binding (1243..1665): X

nrpys: Gly, Ala, Val, Leu, Ile, Abu, Ival

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVFSVAGNIK
Nearest Stachelhaus code(s):: Ala DVFSVALVYK (62% 8� match)
Stachelhaus code match:: 70% (weak)

AMP-binding (2927..3333): X

nrpys: (unknown)

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVLDIGGIGK
Nearest Stachelhaus code(s):: nDodec DVLFIGGVAK (53% 8� match)
Stachelhaus code match:: 70% (weak)

scaffold_65 - Region 1 - NRPS-like

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Location: 14,559 - 78,420 nt. (total: 63,862 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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No matches found.

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 14558 - 78420:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

651837

AMP-binding (55..378): X

nrpys: (unknown)

SVM prediction details:

NOTE: uncertain match

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: ---YLGM--K
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

scaffold_66 - Region 1 - T1PKS

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Location: 29,598 - 94,937 nt. (total: 65,340 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 29597 - 94937:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

957226

PKS_AT (580..873): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; Methylmalonyl-CoA: 70.8%; Ethylmalonyl-CoA: 66.7%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 110.1
Ethylmalonyl-CoA: 87.5
Methoxymalonyl-CoA: 85.9
Malonyl-CoA: 63.3
Isobutyryl-CoA: 60.4
trans-1,2-CPDA: 36.4
Propionyl-CoA: 36.2
2-Methylbutyryl-CoA: 34.1
Acetyl-CoA: 29.1
fatty_acid: 24.6
CHC-CoA: 21.3
Benzoyl-CoA: 21.1
3-Methylbutyryl-CoA: 10.8
inactive: 0.0

scaffold_661 - Region 1 - NRPS-like

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Location: 1 - 24,243 nt. (total: 24,243 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 24243:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1184725

AMP-binding (24..371): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: GLNLIGLVLK
Nearest Stachelhaus code(s):: 2S-Hic GANLIGATIK (32% 8� match); Hpea or dohPen GANLIGATVK (29% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_684 - Region 1 - terpene

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Location: 1 - 23,127 nt. (total: 23,127 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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scaffold_69 - Region 1 - NRPS

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Location: 1 - 42,711 nt. (total: 42,711 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 42711:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1222947

AMP-binding (265..643): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: SARENGAQMK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

AMP-binding (1289..1676): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAYMNCGILK
Nearest Stachelhaus code(s):: Val DAWMFAAILK (50% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_707 - Region 1 - T1PKS

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Location: 1 - 22,157 nt. (total: 22,157 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS monomers

NRPS/PKS monomer predictions

1185005

PKS_AT (531..771): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 66.7%; Methylmalonyl-CoA: 54.2%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 32.9
Methylmalonyl-CoA: 23.5
Malonyl-CoA: 18.3
fatty_acid: 14.8
Isobutyryl-CoA: 12.4
2-Methylbutyryl-CoA: 10.5
Benzoyl-CoA: 9.6
Ethylmalonyl-CoA: 9.3
trans-1,2-CPDA: 0.0
inactive: 0.0
Propionyl-CoA: 0.0
CHC-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

1170724

AMP-binding (46..348): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: HVKVAGF--K
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

scaffold_74 - Region 1 - fungal-RiPP-like

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Location: 10,666 - 123,819 nt. (total: 113,154 nt) Show pHMM detection rules used

fungal-RiPP-like: DUF3328

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scaffold_79 - Region 1 - fungal-RiPP-like

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Location: 56,859 - 123,776 nt. (total: 66,918 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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scaffold_80 - Region 1 - T1PKS

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Location: 1 - 62,799 nt. (total: 62,799 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 62799:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1226389

PKS_AT (913..1206): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 62.5%; Ethylmalonyl-CoA: 58.3%; Methylmalonyl-CoA: 58.3%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 54.1
inactive: 53.6
Methylmalonyl-CoA: 46.1
Malonyl-CoA: 36.8
Propionyl-CoA: 28.5
CHC-CoA: 26.5
Ethylmalonyl-CoA: 22.7
2-Methylbutyryl-CoA: 18.9
fatty_acid: 18.1
trans-1,2-CPDA: 17.9
Acetyl-CoA: 17.8
Benzoyl-CoA: 15.4
3-Methylbutyryl-CoA: 14.1
Isobutyryl-CoA: 12.8

scaffold_802 - Region 1 - T1PKS

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Location: 1 - 17,012 nt. (total: 17,012 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 17012:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

982566

PKS_AT (541..849): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; Methylmalonyl-CoA: 66.7%; Ethylmalonyl-CoA: 62.5%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 96.0
Methoxymalonyl-CoA: 88.3
Ethylmalonyl-CoA: 64.7
Malonyl-CoA: 62.7
Isobutyryl-CoA: 60.9
2-Methylbutyryl-CoA: 45.4
Propionyl-CoA: 37.5
Benzoyl-CoA: 36.7
inactive: 31.6
trans-1,2-CPDA: 27.5
3-Methylbutyryl-CoA: 21.3
fatty_acid: 16.1
CHC-CoA: 10.3
Acetyl-CoA: 2.2

scaffold_81 - Region 1 - NRPS

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Location: 75,026 - 122,476 nt. (total: 47,451 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 75025 - 122476:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-X - X - X - D-X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

747790

AMP-binding (245..641): X

nrpys: nDodec

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVLFVGGVAK
Nearest Stachelhaus code(s):: nDodec DVLFIGGVAK (79% 8� match)
Stachelhaus code match:: 90% (moderate)

AMP-binding (1784..2187): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVQDSGVVTK
Nearest Stachelhaus code(s):: dn-dohHep DVFDFGGVTK (59% 8� match); Gln or Glu DAQDLGVVDK (56% 8� match); Ile DAQDLGVVDK (53% 8� match); Ahp DVENAGVVTK (44% 8� match)
Stachelhaus code match:: 70% (weak)

AMP-binding (2903..3298): X

nrpys: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVSFAGSIWK
Nearest Stachelhaus code(s):: Asn DVAFTGSIWK (76% 8� match)
Stachelhaus code match:: 80% (moderate)

AMP-binding (3979..4371): X

nrpys: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVGYSGIIWK
Nearest Stachelhaus code(s):: Ser DVAYSGMIWK (74% 8� match)
Stachelhaus code match:: 80% (moderate)

scaffold_884 - Region 1 - terpene

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Location: 1 - 13,848 nt. (total: 13,848 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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scaffold_886 - Region 1 - NRPS

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Location: 1 - 13,807 nt. (total: 13,807 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 13807:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Phe)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

771549

Search NORINE for peptide: strict or relaxed

AMP-binding (625..1009): Phe

nrpys: Phe

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic (Phe, Tyr, diOH-Bz, Ph-Gly, bOH-Tyr)
Large clusters prediction:: Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DGHIYVMCGK
Nearest Stachelhaus code(s):: Phe DGHIYVMCGK (91% 8� match)
Stachelhaus code match:: 100% (strong)

scaffold_97 - Region 1 - T1PKS

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Location: 57,143 - 113,267 nt. (total: 56,125 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 57142 - 113267:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

805597

PKS_AT (905..1203): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; inactive: 58.3%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 120.1
inactive: 75.2
Methoxymalonyl-CoA: 69.7
Methylmalonyl-CoA: 68.5
Propionyl-CoA: 41.7
Ethylmalonyl-CoA: 33.1
Acetyl-CoA: 31.9
2-Methylbutyryl-CoA: 26.3
CHC-CoA: 22.5
Benzoyl-CoA: 20.3
Isobutyryl-CoA: 19.2
3-Methylbutyryl-CoA: 17.4
fatty_acid: 16.4
trans-1,2-CPDA: 12.0

scaffold_98 - Region 1 - fungal-RiPP-like

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Location: 27,901 - 112,555 nt. (total: 84,655 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

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