Lobaria pulmonaria Scotland reference genome v1.0

Identified secondary metabolite regions using strictness 'relaxed'

scaffold_1028

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	terpene	1	15,424

scaffold_103

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	NRPS,T1PKS	17,835	84,797	pyranoviolin A	Polyketide+NRP	37%

scaffold_1083

Region	Type	From	To	Most similar known cluster		Similarity
Region 95.1	T1PKS	1	14,102	1,3,6,8-tetrahydroxynaphthalene	Polyketide	100%

scaffold_1111

Region	Type	From	To	Most similar known cluster		Similarity
Region 127.1	NRPS	1	13,586

scaffold_114

Region	Type	From	To	Most similar known cluster		Similarity
Region 158.1	T1PKS	17,876	81,436	waikikiamide A/waikikiamide B/waikikiamide C/(+)-semivioxanthin/semivioxanthin	Polyketide	36%

scaffold_115

Region	Type	From	To	Most similar known cluster		Similarity
Region 169.1	fungal-RiPP-like	1	79,146

scaffold_1152

Region	Type	From	To	Most similar known cluster		Similarity
Region 172.1	fungal-RiPP-like	1	12,937

scaffold_116

Region	Type	From	To	Most similar known cluster		Similarity
Region 180.1	fungal-RiPP-like	1	68,432

scaffold_1179

Region	Type	From	To	Most similar known cluster		Similarity
Region 201.1	terpene	1	12,546	squalestatin S1	Terpene	40%

scaffold_123

Region	Type	From	To	Most similar known cluster		Similarity
Region 258.1	T1PKS	21,953	79,911

scaffold_1234

Region	Type	From	To	Most similar known cluster		Similarity
Region 263.1	T1PKS	1	11,683	naphthopyrone	Polyketide	100%

scaffold_125

Region	Type	From	To	Most similar known cluster		Similarity
Region 280.1	terpene	3,097	34,726

scaffold_129

Region	Type	From	To	Most similar known cluster		Similarity
Region 324.1	terpene	51,762	76,611

scaffold_13

Region	Type	From	To	Most similar known cluster		Similarity
Region 335.1	fungal-RiPP-like	1	84,513
Region 335.2	T1PKS	90,864	159,785

scaffold_1322

Region	Type	From	To	Most similar known cluster		Similarity
Region 361.1	fungal-RiPP-like	1	10,223

scaffold_136

Region	Type	From	To	Most similar known cluster		Similarity
Region 402.1	T1PKS,NRPS	1	42,855

scaffold_1368

Region	Type	From	To	Most similar known cluster		Similarity
Region 411.1	terpene	1	9,598

scaffold_141

Region	Type	From	To	Most similar known cluster		Similarity
Region 458.1	fungal-RiPP-like	18,227	75,108

scaffold_142

Region	Type	From	To	Most similar known cluster		Similarity
Region 469.1	terpene	26,839	58,622	botcinin H/botcinin I/botcinin J/cinbotolide D/botcinin K	Terpene	71%

scaffold_143

Region	Type	From	To	Most similar known cluster		Similarity
Region 480.1	terpene	54,563	74,355

scaffold_147

Region	Type	From	To	Most similar known cluster		Similarity
Region 524.1	terpene,T1PKS	1	73,976

scaffold_15

Region	Type	From	To	Most similar known cluster		Similarity
Region 557.1	T1PKS,NRPS	112,734	215,988	leucinostatin A/leucinostatin B	NRP+Polyketide	10%

scaffold_152

Region	Type	From	To	Most similar known cluster		Similarity
Region 580.1	fungal-RiPP-like	1	51,811

scaffold_1528

Region	Type	From	To	Most similar known cluster		Similarity
Region 589.1	fungal-RiPP-like	1	7,092

scaffold_156

Region	Type	From	To	Most similar known cluster		Similarity
Region 624.1	T1PKS,NRPS	1	69,924	cytochalasin E/cytochalasin K	NRP+Polyketide:Iterative type I polyketide	46%

scaffold_159

Region	Type	From	To	Most similar known cluster		Similarity
Region 657.1	indole	17,949	49,052

scaffold_16

Region	Type	From	To	Most similar known cluster		Similarity
Region 668.1	T1PKS	28,649	97,632	betaenone A/betaenone B/betaenone C	Polyketide	37%

scaffold_163

Region	Type	From	To	Most similar known cluster		Similarity
Region 702.1	terpene	22,756	54,530

scaffold_167

Region	Type	From	To	Most similar known cluster		Similarity
Region 746.1	T1PKS	1	38,687

scaffold_174

Region	Type	From	To	Most similar known cluster		Similarity
Region 824.1	T1PKS	1	67,304	4-epi-15-epi-brefeldin A	Polyketide:Iterative type I polyketide	30%

scaffold_18

Region	Type	From	To	Most similar known cluster		Similarity
Region 890.1	T1PKS	48,370	116,291	usnic acid	Polyketide	26%

scaffold_181

Region	Type	From	To	Most similar known cluster		Similarity
Region 902.1	T1PKS,indole	1,138	66,744	cryptosporioptide B/cryptosporioptide A/cryptosporioptide C	Polyketide:Iterative type I polyketide	26%

scaffold_183

Region	Type	From	To	Most similar known cluster		Similarity
Region 924.1	T1PKS	5,261	66,087	HEx-pks1 polyketide	Polyketide	60%

scaffold_190

Region	Type	From	To	Most similar known cluster		Similarity
Region 1002.1	T1PKS	8,662	65,011

scaffold_192

Region	Type	From	To	Most similar known cluster		Similarity
Region 1016.1	T1PKS	15,060	64,605

scaffold_209

Region	Type	From	To	Most similar known cluster		Similarity
Region 1035.1	NRPS-like	1	33,922

scaffold_21

Region	Type	From	To	Most similar known cluster		Similarity
Region 1036.1	T1PKS	1	64,579

scaffold_215

Region	Type	From	To	Most similar known cluster		Similarity
Region 1042.1	fungal-RiPP-like	1	60,614

scaffold_221

Region	Type	From	To	Most similar known cluster		Similarity
Region 1049.1	T1PKS	1	59,818	monascorubrin	Polyketide	100%

scaffold_226

Region	Type	From	To	Most similar known cluster		Similarity
Region 1054.1	T1PKS	11,315	59,448	4-oxomacrophorin A/macrophorin A/5'-epimacrophorin B	Terpene	63%

scaffold_227

Region	Type	From	To	Most similar known cluster		Similarity
Region 1055.1	fungal-RiPP-like	1	59,307

scaffold_235

Region	Type	From	To	Most similar known cluster		Similarity
Region 1064.1	fungal-RiPP-like	1	58,305

scaffold_240

Region	Type	From	To	Most similar known cluster		Similarity
Region 1070.1	fungal-RiPP-like	1	57,383

scaffold_244

Region	Type	From	To	Most similar known cluster		Similarity
Region 1074.1	T1PKS,NRPS-like	6,719	56,916	2,4-dihydroxy-5,6-dimethyl benzaldehyde	Polyketide	28%

scaffold_25

Region	Type	From	To	Most similar known cluster		Similarity
Region 1080.1	T1PKS	56,668	125,224	oryzine A/oryzine B	Other	12%

scaffold_265

Region	Type	From	To	Most similar known cluster		Similarity
Region 1097.1	NRPS	1	54,683

scaffold_266

Region	Type	From	To	Most similar known cluster		Similarity
Region 1098.1	terpene	37,766	54,625

scaffold_28

Region	Type	From	To	Most similar known cluster		Similarity
Region 1113.1	NRPS-like	1	51,990

scaffold_289

Region	Type	From	To	Most similar known cluster		Similarity
Region 1123.1	NRPS-like	17,953	51,597

scaffold_293

Region	Type	From	To	Most similar known cluster		Similarity
Region 1128.1	T1PKS	2,275	51,343	oxyjavanicin	Polyketide	25%

scaffold_304

Region	Type	From	To	Most similar known cluster		Similarity
Region 1141.1	NRPS-like	11,046	50,121

scaffold_309

Region	Type	From	To	Most similar known cluster		Similarity
Region 1146.1	terpene	3,909	35,135

scaffold_360

Region	Type	From	To	Most similar known cluster		Similarity
Region 1203.1	fungal-RiPP-like	1	45,854

scaffold_367

Region	Type	From	To	Most similar known cluster		Similarity
Region 1210.1	NRPS-like	1	45,334

scaffold_368

Region	Type	From	To	Most similar known cluster		Similarity
Region 1211.1	T1PKS,terpene	1	45,268

scaffold_37

Region	Type	From	To	Most similar known cluster		Similarity
Region 1213.1	indole	1	25,124

scaffold_372

Region	Type	From	To	Most similar known cluster		Similarity
Region 1216.1	NRPS,indole	1	44,781

scaffold_400

Region	Type	From	To	Most similar known cluster		Similarity
Region 1248.1	terpene	1	18,459

scaffold_402

Region	Type	From	To	Most similar known cluster		Similarity
Region 1250.1	T1PKS	944	41,973

scaffold_414

Region	Type	From	To	Most similar known cluster		Similarity
Region 1263.1	terpene	1	23,703

scaffold_420

Region	Type	From	To	Most similar known cluster		Similarity
Region 1270.1	T1PKS	1	40,796	ochratoxin A	NRP+Polyketide	100%

scaffold_432

Region	Type	From	To	Most similar known cluster		Similarity
Region 1283.1	T1PKS	1	39,836	1,3,6,8-tetrahydroxynaphthalene	Polyketide	100%

scaffold_450

Region	Type	From	To	Most similar known cluster		Similarity
Region 1303.1	indole	1	18,195

scaffold_459

Region	Type	From	To	Most similar known cluster		Similarity
Region 1312.1	NRPS-like	3,731	38,280

scaffold_463

Region	Type	From	To	Most similar known cluster		Similarity
Region 1317.1	terpene	1	26,708

scaffold_464

Region	Type	From	To	Most similar known cluster		Similarity
Region 1318.1	indole	15,754	38,112	biscognienyne B/eutypinic acid/compound 3/4-hydroxy-3-prenylbenzoic acid/prenylhydroquinone/compound 15/compound 8/compound 7/compound 6/compound 11/compound 12/pestalodiol E	Other	63%

scaffold_484

Region	Type	From	To	Most similar known cluster		Similarity
Region 1340.1	terpene	70	31,272

scaffold_489

Region	Type	From	To	Most similar known cluster		Similarity
Region 1345.1	T1PKS	1	36,188

scaffold_49

Region	Type	From	To	Most similar known cluster		Similarity
Region 1346.1	NRPS	47,523	122,700	fellutamide B	NRP	57%

scaffold_492

Region	Type	From	To	Most similar known cluster		Similarity
Region 1349.1	T1PKS	586	36,132	terreic acid	Polyketide	33%

scaffold_499

Region	Type	From	To	Most similar known cluster		Similarity
Region 1356.1	fungal-RiPP-like	1	35,954

scaffold_50

Region	Type	From	To	Most similar known cluster		Similarity
Region 1358.1	fungal-RiPP-like	65,111	122,348

scaffold_506

Region	Type	From	To	Most similar known cluster		Similarity
Region 1365.1	T1PKS	1	35,600	eupenifeldin	Terpene	36%

scaffold_529

Region	Type	From	To	Most similar known cluster		Similarity
Region 1390.1	fungal-RiPP-like	1	33,900

scaffold_530

Region	Type	From	To	Most similar known cluster		Similarity
Region 1392.1	fungal-RiPP-like	1	33,782

scaffold_544

Region	Type	From	To	Most similar known cluster		Similarity
Region 1407.1	NRPS-like	1	32,975

scaffold_547

Region	Type	From	To	Most similar known cluster		Similarity
Region 1410.1	NRPS	1	32,743

scaffold_549

Region	Type	From	To	Most similar known cluster		Similarity
Region 1412.1	T1PKS,NRPS	1	32,714

scaffold_596

Region	Type	From	To	Most similar known cluster		Similarity
Region 1464.1	NRPS-like	1	29,645

scaffold_597

Region	Type	From	To	Most similar known cluster		Similarity
Region 1465.1	NRPS-like	1	29,552

scaffold_599

Region	Type	From	To	Most similar known cluster		Similarity
Region 1467.1	fungal-RiPP-like	1	29,503

scaffold_600

Region	Type	From	To	Most similar known cluster		Similarity
Region 1470.1	fungal-RiPP-like	1	29,484

scaffold_61

Region	Type	From	To	Most similar known cluster		Similarity
Region 1480.1	terpene	1	28,783

scaffold_642

Region	Type	From	To	Most similar known cluster		Similarity
Region 1516.1	T1PKS	1	27,880

scaffold_654

Region	Type	From	To	Most similar known cluster		Similarity
Region 1529.1	NRPS	1	27,522

scaffold_655

Region	Type	From	To	Most similar known cluster		Similarity
Region 1530.1	fungal-RiPP-like	1	27,516

scaffold_673

Region	Type	From	To	Most similar known cluster		Similarity
Region 1550.1	T1PKS	1	26,692

scaffold_676

Region	Type	From	To	Most similar known cluster		Similarity
Region 1553.1	NRP-metallophore,NRPS	1	26,617

scaffold_686

Region	Type	From	To	Most similar known cluster		Similarity
Region 1564.1	fungal-RiPP-like	1	26,110

scaffold_698

Region	Type	From	To	Most similar known cluster		Similarity
Region 1577.1	NRPS-like	1	25,684

scaffold_71

Region	Type	From	To	Most similar known cluster		Similarity
Region 1591.1	T1PKS	22,907	90,551

scaffold_734

Region	Type	From	To	Most similar known cluster		Similarity
Region 1618.1	T1PKS	1	24,120

scaffold_75

Region	Type	From	To	Most similar known cluster		Similarity
Region 1635.1	NRPS-like	1	35,976	aspulvinone H/aspulvinone B1	NRP	100%

scaffold_811

Region	Type	From	To	Most similar known cluster		Similarity
Region 1704.1	fungal-RiPP-like	1	21,664

scaffold_82

Region	Type	From	To	Most similar known cluster		Similarity
Region 1713.1	T1PKS	58,461	94,128

scaffold_873

Region	Type	From	To	Most similar known cluster		Similarity
Region 1772.1	T1PKS	1	19,604

scaffold_91

Region	Type	From	To	Most similar known cluster		Similarity
Region 1813.1	NRPS	1	42,852

scaffold_95

Region	Type	From	To	Most similar known cluster		Similarity
Region 1857.1	fungal-RiPP-like	1	57,731

scaffold_982

Region	Type	From	To	Most similar known cluster		Similarity
Region 1893.1	T1PKS	1	16,474

No secondary metabolite regions were found in these records:: scaffold_1; scaffold_10; scaffold_100; scaffold_1000; scaffold_1001; scaffold_1002; scaffold_1003; scaffold_1004; scaffold_1005; scaffold_1006; scaffold_1007; scaffold_1008; scaffold_1009; scaffold_101; scaffold_1010; scaffold_1011; scaffold_1012; scaffold_1013; scaffold_1014; scaffold_1015; scaffold_1016; scaffold_1017; scaffold_1018; scaffold_1019; scaffold_102; scaffold_1020; scaffold_1021; scaffold_1022; scaffold_1023; scaffold_1024; scaffold_1025; scaffold_1026; scaffold_1027; scaffold_1029; scaffold_1030; scaffold_1031; scaffold_1032; scaffold_1033; scaffold_1034; scaffold_1035; scaffold_1036; scaffold_1037; scaffold_1038; scaffold_1039; scaffold_104; scaffold_1040; scaffold_1041; scaffold_1042; scaffold_1043; scaffold_1044; scaffold_1045; scaffold_1046; scaffold_1047; scaffold_1048; scaffold_1049; scaffold_105; scaffold_1050; scaffold_1051; scaffold_1052; scaffold_1053; scaffold_1054; scaffold_1055; scaffold_1056; scaffold_1057; scaffold_1058; scaffold_1059; scaffold_106; scaffold_1060; scaffold_1061; scaffold_1062; scaffold_1063; scaffold_1064; scaffold_1065; scaffold_1066; scaffold_1067; scaffold_1068; scaffold_1069; scaffold_107; scaffold_1070; scaffold_1071; scaffold_1072; scaffold_1073; scaffold_1074; scaffold_1075; scaffold_1076; scaffold_1077; scaffold_1078; scaffold_1079; scaffold_108; scaffold_1080; scaffold_1081; scaffold_1082; scaffold_1084; scaffold_1085; scaffold_1086; scaffold_1087; scaffold_1088; scaffold_1089; scaffold_109; scaffold_1090; scaffold_1091; scaffold_1092; scaffold_1093; scaffold_1094; scaffold_1095; scaffold_1096; scaffold_1097; scaffold_1098; scaffold_1099; scaffold_11; scaffold_110; scaffold_1100; scaffold_1101; scaffold_1102; scaffold_1103; scaffold_1104; scaffold_1105; scaffold_1106; scaffold_1107; scaffold_1108; scaffold_1109; scaffold_111; scaffold_1110; scaffold_1112; scaffold_1113; scaffold_1114; scaffold_1115; scaffold_1116; scaffold_1117; scaffold_1118; scaffold_1119; scaffold_112; scaffold_1120; scaffold_1121; scaffold_1122; scaffold_1123; scaffold_1124; scaffold_1125; scaffold_1126; scaffold_1127; scaffold_1128; scaffold_1129; scaffold_113; scaffold_1130; scaffold_1131; scaffold_1132; scaffold_1133; scaffold_1134; scaffold_1135; scaffold_1136; scaffold_1137; scaffold_1138; scaffold_1139; scaffold_1140; scaffold_1141; scaffold_1142; scaffold_1143; scaffold_1144; scaffold_1145; scaffold_1146; scaffold_1147; scaffold_1148; scaffold_1149; scaffold_1150; scaffold_1151; scaffold_1153; scaffold_1154; scaffold_1155; scaffold_1156; scaffold_1157; scaffold_1158; scaffold_1159; scaffold_1160; scaffold_1161; scaffold_1162; scaffold_1163; scaffold_1164; scaffold_1165; scaffold_1166; scaffold_1167; scaffold_1168; scaffold_1169; scaffold_117; scaffold_1170; scaffold_1171; scaffold_1172; scaffold_1173; scaffold_1174; scaffold_1175; scaffold_1176; scaffold_1177; scaffold_1178; scaffold_118; scaffold_1180; scaffold_1181; scaffold_1182; scaffold_1183; scaffold_1184; scaffold_1185; scaffold_1186; scaffold_1187; scaffold_1188; scaffold_1189; scaffold_119; scaffold_1190; scaffold_1191; scaffold_1192; scaffold_1193; scaffold_1194; scaffold_1195; scaffold_1196; scaffold_1197; scaffold_1198; scaffold_1199; scaffold_12; scaffold_120; scaffold_1200; scaffold_1201; scaffold_1202; scaffold_1203; scaffold_1204; scaffold_1205; scaffold_1206; scaffold_1207; scaffold_1208; scaffold_1209; scaffold_121; scaffold_1210; scaffold_1211; scaffold_1212; scaffold_1213; scaffold_1214; scaffold_1215; scaffold_1216; scaffold_1217; scaffold_1218; scaffold_1219; scaffold_122; scaffold_1220; scaffold_1221; scaffold_1222; scaffold_1223; scaffold_1224; scaffold_1225; scaffold_1226; scaffold_1227; scaffold_1228; scaffold_1229; scaffold_1230; scaffold_1231; scaffold_1232; scaffold_1233; scaffold_1235; scaffold_1236; scaffold_1237; scaffold_1238; scaffold_1239; scaffold_124; scaffold_1240; scaffold_1241; scaffold_1242; scaffold_1243; scaffold_1244; scaffold_1245; scaffold_1246; scaffold_1247; scaffold_1248; scaffold_1249; scaffold_1250; scaffold_1251; scaffold_1252; scaffold_1253; scaffold_1254; scaffold_1255; scaffold_1256; scaffold_1257; scaffold_1258; scaffold_1259; scaffold_126; scaffold_1260; scaffold_1261; scaffold_1262; scaffold_1263; scaffold_1264; scaffold_1265; scaffold_1266; scaffold_1267; scaffold_1268; scaffold_1269; scaffold_127; scaffold_1270; scaffold_1271; scaffold_1272; scaffold_1273; scaffold_1274; scaffold_1275; scaffold_1276; scaffold_1277; scaffold_1278; scaffold_1279; scaffold_128; scaffold_1280; scaffold_1281; scaffold_1282; scaffold_1283; scaffold_1284; scaffold_1285; scaffold_1286; scaffold_1287; scaffold_1288; scaffold_1289; scaffold_1290; scaffold_1291; scaffold_1292; scaffold_1293; scaffold_1294; scaffold_1295; scaffold_1296; scaffold_1297; scaffold_1298; scaffold_1299; scaffold_130; scaffold_1300; scaffold_1301; scaffold_1302; scaffold_1303; scaffold_1304; scaffold_1305; scaffold_1306; scaffold_1307; scaffold_1308; scaffold_1309; scaffold_131; scaffold_1310; scaffold_1311; scaffold_1312; scaffold_1313; scaffold_1314; scaffold_1315; scaffold_1316; scaffold_1317; scaffold_1318; scaffold_1319; scaffold_132; scaffold_1320; scaffold_1321; scaffold_1323; scaffold_1324; scaffold_1325; scaffold_1326; scaffold_1327; scaffold_1328; scaffold_1329; scaffold_133; scaffold_1330; scaffold_1331; scaffold_1332; scaffold_1333; scaffold_1334; scaffold_1335; scaffold_1336; scaffold_1337; scaffold_1338; scaffold_1339; scaffold_134; scaffold_1340; scaffold_1341; scaffold_1342; scaffold_1343; scaffold_1344; scaffold_1345; scaffold_1346; scaffold_1347; scaffold_1348; scaffold_1349; scaffold_135; scaffold_1350; scaffold_1351; scaffold_1352; scaffold_1353; scaffold_1354; scaffold_1355; scaffold_1356; scaffold_1357; scaffold_1358; scaffold_1359; scaffold_1360; scaffold_1361; scaffold_1362; scaffold_1363; scaffold_1364; scaffold_1365; scaffold_1366; scaffold_1367; scaffold_1369; scaffold_137; scaffold_1370; scaffold_1371; scaffold_1372; scaffold_1373; scaffold_1374; scaffold_1375; scaffold_1376; scaffold_1377; scaffold_1378; scaffold_1379; scaffold_138; scaffold_1380; scaffold_1381; scaffold_1382; scaffold_1383; scaffold_1384; scaffold_1385; scaffold_1386; scaffold_1387; scaffold_1388; scaffold_1389; scaffold_139; scaffold_1390; scaffold_1391; scaffold_1392; scaffold_1393; scaffold_1394; scaffold_1395; scaffold_1396; scaffold_1397; scaffold_1398; scaffold_1399; scaffold_14; scaffold_140; scaffold_1400; scaffold_1401; scaffold_1402; scaffold_1403; scaffold_1404; scaffold_1405; scaffold_1406; scaffold_1407; scaffold_1408; scaffold_1409; scaffold_1410; scaffold_1411; scaffold_1412; scaffold_1413; scaffold_1414; scaffold_1415; scaffold_1416; scaffold_1417; scaffold_1418; scaffold_1419; scaffold_1420; scaffold_1421; scaffold_1422; scaffold_1423; scaffold_1424; scaffold_1425; scaffold_1426; scaffold_1427; scaffold_1428; scaffold_1429; scaffold_1430; scaffold_1431; scaffold_1432; scaffold_1433; scaffold_1434; scaffold_1435; scaffold_1436; scaffold_1437; scaffold_1438; scaffold_1439; scaffold_144; scaffold_1440; scaffold_1441; scaffold_1442; scaffold_1443; scaffold_1444; scaffold_1445; scaffold_1446; scaffold_1447; scaffold_1448; scaffold_1449; scaffold_145; scaffold_1450; scaffold_1451; scaffold_1452; scaffold_1453; scaffold_1454; scaffold_1455; scaffold_1456; scaffold_1457; scaffold_1458; scaffold_1459; scaffold_146; scaffold_1460; scaffold_1461; scaffold_1462; scaffold_1463; scaffold_1464; scaffold_1465; scaffold_1466; scaffold_1467; scaffold_1468; scaffold_1469; scaffold_1470; scaffold_1471; scaffold_1472; scaffold_1473; scaffold_1474; scaffold_1475; scaffold_1476; scaffold_1477; scaffold_1478; scaffold_1479; scaffold_148; scaffold_1480; scaffold_1481; scaffold_1482; scaffold_1483; scaffold_1484; scaffold_1485; scaffold_1486; scaffold_1487; scaffold_1488; scaffold_1489; scaffold_149; scaffold_1490; scaffold_1491; scaffold_1492; scaffold_1493; scaffold_1494; scaffold_1495; scaffold_1496; scaffold_1497; scaffold_1498; scaffold_1499; scaffold_150; scaffold_1500; scaffold_1501; scaffold_1502; scaffold_1503; scaffold_1504; scaffold_1505; scaffold_1506; scaffold_1507; scaffold_1508; scaffold_1509; scaffold_151; scaffold_1510; scaffold_1511; scaffold_1512; scaffold_1513; scaffold_1514; scaffold_1515; scaffold_1516; scaffold_1517; scaffold_1518; scaffold_1519; scaffold_1520; scaffold_1521; scaffold_1522; scaffold_1523; scaffold_1524; scaffold_1525; scaffold_1526; scaffold_1527; scaffold_1529; scaffold_153; scaffold_1530; scaffold_1531; scaffold_1532; scaffold_1533; scaffold_1534; scaffold_1535; scaffold_1536; scaffold_1537; scaffold_1538; scaffold_1539; scaffold_154; scaffold_1540; scaffold_1541; scaffold_1542; scaffold_1543; scaffold_1544; scaffold_1545; scaffold_1546; scaffold_1547; scaffold_1548; scaffold_1549; scaffold_155; scaffold_1550; scaffold_1551; scaffold_1552; scaffold_1553; scaffold_1554; scaffold_1555; scaffold_1556; scaffold_1557; scaffold_1558; scaffold_1559; scaffold_1560; scaffold_1561; scaffold_1562; scaffold_1563; scaffold_1564; scaffold_1565; scaffold_1566; scaffold_1567; scaffold_1568; scaffold_1569; scaffold_157; scaffold_1570; scaffold_1571; scaffold_1572; scaffold_1573; scaffold_1574; scaffold_1575; scaffold_1576; scaffold_1577; scaffold_1578; scaffold_1579; scaffold_158; scaffold_1580; scaffold_1581; scaffold_1582; scaffold_1583; scaffold_1584; scaffold_1585; scaffold_1586; scaffold_1587; scaffold_1588; scaffold_1589; scaffold_1590; scaffold_1591; scaffold_1592; scaffold_1593; scaffold_1594; scaffold_1595; scaffold_1596; scaffold_1597; scaffold_1598; scaffold_1599; scaffold_160; scaffold_1600; scaffold_1601; scaffold_1602; scaffold_1603; scaffold_1604; scaffold_1605; scaffold_1606; scaffold_1607; scaffold_1608; scaffold_1609; scaffold_161; scaffold_1610; scaffold_1611; scaffold_1612; scaffold_1613; scaffold_1614; scaffold_1615; scaffold_1616; scaffold_1617; scaffold_1618; scaffold_1619; scaffold_162; scaffold_1620; scaffold_1621; scaffold_1622; scaffold_1623; scaffold_1624; scaffold_1625; scaffold_1626; scaffold_1627; scaffold_1628; scaffold_1629; scaffold_1630; scaffold_1631; scaffold_1632; scaffold_1633; scaffold_1634; scaffold_1635; scaffold_1636; scaffold_1637; scaffold_1638; scaffold_1639; scaffold_164; scaffold_1640; scaffold_1641; scaffold_1642; scaffold_1643; scaffold_1644; scaffold_1645; scaffold_1646; scaffold_1647; scaffold_1648; scaffold_1649; scaffold_165; scaffold_1650; scaffold_1651; scaffold_1652; scaffold_1653; scaffold_1654; scaffold_1655; scaffold_1656; scaffold_1657; scaffold_1658; scaffold_1659; scaffold_166; scaffold_1660; scaffold_1661; scaffold_1662; scaffold_1663; scaffold_1664; scaffold_1665; scaffold_1666; scaffold_1667; scaffold_1668; scaffold_1669; scaffold_1670; scaffold_1671; scaffold_1672; scaffold_1673; scaffold_1674; scaffold_1675; scaffold_1676; scaffold_1677; scaffold_1678; scaffold_1679; scaffold_168; scaffold_1680; scaffold_1681; scaffold_1682; scaffold_1683; scaffold_1684; scaffold_1685; scaffold_1686; scaffold_1687; scaffold_1688; scaffold_1689; scaffold_169; scaffold_1690; scaffold_1691; scaffold_1692; scaffold_1693; scaffold_1694; scaffold_1695; scaffold_1696; scaffold_1697; scaffold_1698; scaffold_1699; scaffold_17; scaffold_170; scaffold_1700; scaffold_1701; scaffold_1702; scaffold_1703; scaffold_1704; scaffold_1705; scaffold_1706; scaffold_1707; scaffold_1708; scaffold_1709; scaffold_171; scaffold_1710; scaffold_1711; scaffold_1712; scaffold_1713; scaffold_1714; scaffold_1715; scaffold_1716; scaffold_1717; scaffold_1718; scaffold_1719; scaffold_172; scaffold_1720; scaffold_1721; scaffold_1722; scaffold_1723; scaffold_1724; scaffold_1725; scaffold_1726; scaffold_1727; scaffold_1728; scaffold_1729; scaffold_173; scaffold_1730; scaffold_1731; scaffold_1732; scaffold_1733; scaffold_1734; scaffold_1735; scaffold_1736; scaffold_1737; scaffold_1738; scaffold_1739; scaffold_1740; scaffold_1741; scaffold_1742; scaffold_1743; scaffold_1744; scaffold_1745; scaffold_1746; scaffold_1747; scaffold_1748; scaffold_1749; scaffold_175; scaffold_1750; scaffold_1751; scaffold_1752; scaffold_1753; scaffold_1754; scaffold_1755; scaffold_1756; scaffold_1757; scaffold_1758; scaffold_1759; scaffold_176; scaffold_1760; scaffold_1761; scaffold_1762; scaffold_1763; scaffold_1764; scaffold_1765; scaffold_1766; scaffold_1767; scaffold_1768; scaffold_1769; scaffold_177; scaffold_1770; scaffold_1771; scaffold_1772; scaffold_1773; scaffold_1774; scaffold_1775; scaffold_1776; scaffold_1777; scaffold_1778; scaffold_1779; scaffold_178; scaffold_1780; scaffold_1781; scaffold_1782; scaffold_1783; scaffold_1784; scaffold_1785; scaffold_1786; scaffold_1787; scaffold_1788; scaffold_1789; scaffold_179; scaffold_1790; scaffold_1791; scaffold_1792; scaffold_1793; scaffold_1794; scaffold_1795; scaffold_1796; scaffold_1797; scaffold_1798; scaffold_1799; scaffold_180; scaffold_1800; scaffold_1801; scaffold_1802; scaffold_1803; scaffold_1804; scaffold_1805; scaffold_1806; scaffold_1807; scaffold_1808; scaffold_1809; scaffold_1810; scaffold_1811; scaffold_1812; scaffold_1813; scaffold_1814; scaffold_1815; scaffold_1816; scaffold_1817; scaffold_1818; scaffold_1819; scaffold_182; scaffold_1820; scaffold_1821; scaffold_1822; scaffold_1823; scaffold_1824; scaffold_1825; scaffold_1826; scaffold_1827; scaffold_1828; scaffold_1829; scaffold_1830; scaffold_1831; scaffold_1832; scaffold_1833; scaffold_1834; scaffold_1835; scaffold_1836; scaffold_1837; scaffold_1838; scaffold_1839; scaffold_184; scaffold_1840; scaffold_1841; scaffold_1842; scaffold_1843; scaffold_1844; scaffold_1845; scaffold_1846; scaffold_1847; scaffold_1848; scaffold_1849; scaffold_185; scaffold_1850; scaffold_1851; scaffold_1852; scaffold_1853; scaffold_1854; scaffold_1855; scaffold_1856; scaffold_1857; scaffold_1858; scaffold_1859; scaffold_186; scaffold_1860; scaffold_1861; scaffold_1862; scaffold_1863; scaffold_1864; scaffold_1865; scaffold_1866; scaffold_1867; scaffold_1868; scaffold_1869; scaffold_187; scaffold_1870; scaffold_1871; scaffold_1872; scaffold_1873; scaffold_1874; scaffold_1875; scaffold_1876; scaffold_1877; scaffold_1878; scaffold_1879; scaffold_188; scaffold_1880; scaffold_1881; scaffold_1882; scaffold_1883; scaffold_1884; scaffold_1885; scaffold_1886; scaffold_1887; scaffold_1888; scaffold_1889; scaffold_189; scaffold_1890; scaffold_1891; scaffold_1892; scaffold_1893; scaffold_1894; scaffold_1895; scaffold_1896; scaffold_1897; scaffold_1898; scaffold_1899; scaffold_19; scaffold_1900; scaffold_1901; scaffold_1902; scaffold_1903; scaffold_1904; scaffold_1905; scaffold_1906; scaffold_1907; scaffold_1908; scaffold_1909; scaffold_191; scaffold_1910; scaffold_1911; scaffold_193; scaffold_194; scaffold_195; scaffold_196; scaffold_197; scaffold_198; scaffold_199; scaffold_2; scaffold_20; scaffold_200; scaffold_201; scaffold_202; scaffold_203; scaffold_204; scaffold_205; scaffold_206; scaffold_207; scaffold_208; scaffold_210; scaffold_211; scaffold_212; scaffold_213; scaffold_214; scaffold_216; scaffold_217; scaffold_218; scaffold_219; scaffold_22; scaffold_220; scaffold_222; scaffold_223; scaffold_224; scaffold_225; scaffold_228; scaffold_229; scaffold_23; scaffold_230; scaffold_231; scaffold_232; scaffold_233; scaffold_234; scaffold_236; scaffold_237; scaffold_238; scaffold_239; scaffold_24; scaffold_241; scaffold_242; scaffold_243; scaffold_245; scaffold_246; scaffold_247; scaffold_248; scaffold_249; scaffold_250; scaffold_251; scaffold_252; scaffold_253; scaffold_254; scaffold_255; scaffold_256; scaffold_257; scaffold_258; scaffold_259; scaffold_26; scaffold_260; scaffold_261; scaffold_262; scaffold_263; scaffold_264; scaffold_267; scaffold_268; scaffold_269; scaffold_27; scaffold_270; scaffold_271; scaffold_272; scaffold_273; scaffold_274; scaffold_275; scaffold_276; scaffold_277; scaffold_278; scaffold_279; scaffold_280; scaffold_281; scaffold_282; scaffold_283; scaffold_284; scaffold_285; scaffold_286; scaffold_287; scaffold_288; scaffold_29; scaffold_290; scaffold_291; scaffold_292; scaffold_294; scaffold_295; scaffold_296; scaffold_297; scaffold_298; scaffold_299; scaffold_3; scaffold_30; scaffold_300; scaffold_301; scaffold_302; scaffold_303; scaffold_305; scaffold_306; scaffold_307; scaffold_308; scaffold_31; scaffold_310; scaffold_311; scaffold_312; scaffold_313; scaffold_314; scaffold_315; scaffold_316; scaffold_317; scaffold_318; scaffold_319; scaffold_32; scaffold_320; scaffold_321; scaffold_322; scaffold_323; scaffold_324; scaffold_325; scaffold_326; scaffold_327; scaffold_328; scaffold_329; scaffold_33; scaffold_330; scaffold_331; scaffold_332; scaffold_333; scaffold_334; scaffold_335; scaffold_336; scaffold_337; scaffold_338; scaffold_339; scaffold_34; scaffold_340; scaffold_341; scaffold_342; scaffold_343; scaffold_344; scaffold_345; scaffold_346; scaffold_347; scaffold_348; scaffold_349; scaffold_35; scaffold_350; scaffold_351; scaffold_352; scaffold_353; scaffold_354; scaffold_355; scaffold_356; scaffold_357; scaffold_358; scaffold_359; scaffold_36; scaffold_361; scaffold_362; scaffold_363; scaffold_364; scaffold_365; scaffold_366; scaffold_369; scaffold_370; scaffold_371; scaffold_373; scaffold_374; scaffold_375; scaffold_376; scaffold_377; scaffold_378; scaffold_379; scaffold_38; scaffold_380; scaffold_381; scaffold_382; scaffold_383; scaffold_384; scaffold_385; scaffold_386; scaffold_387; scaffold_388; scaffold_389; scaffold_39; scaffold_390; scaffold_391; scaffold_392; scaffold_393; scaffold_394; scaffold_395; scaffold_396; scaffold_397; scaffold_398; scaffold_399; scaffold_4; scaffold_40; scaffold_401; scaffold_403; scaffold_404; scaffold_405; scaffold_406; scaffold_407; scaffold_408; scaffold_409; scaffold_41; scaffold_410; scaffold_411; scaffold_412; scaffold_413; scaffold_415; scaffold_416; scaffold_417; scaffold_418; scaffold_419; scaffold_42; scaffold_421; scaffold_422; scaffold_423; scaffold_424; scaffold_425; scaffold_426; scaffold_427; scaffold_428; scaffold_429; scaffold_43; scaffold_430; scaffold_431; scaffold_433; scaffold_434; scaffold_435; scaffold_436; scaffold_437; scaffold_438; scaffold_439; scaffold_44; scaffold_440; scaffold_441; scaffold_442; scaffold_443; scaffold_444; scaffold_445; scaffold_446; scaffold_447; scaffold_448; scaffold_449; scaffold_45; scaffold_451; scaffold_452; scaffold_453; scaffold_454; scaffold_455; scaffold_456; scaffold_457; scaffold_458; scaffold_46; scaffold_460; scaffold_461; scaffold_462; scaffold_465; scaffold_466; scaffold_467; scaffold_468; scaffold_469; scaffold_47; scaffold_470; scaffold_471; scaffold_472; scaffold_473; scaffold_474; scaffold_475; scaffold_476; scaffold_477; scaffold_478; scaffold_479; scaffold_48; scaffold_480; scaffold_481; scaffold_482; scaffold_483; scaffold_485; scaffold_486; scaffold_487; scaffold_488; scaffold_490; scaffold_491; scaffold_493; scaffold_494; scaffold_495; scaffold_496; scaffold_497; scaffold_498; scaffold_5; scaffold_500; scaffold_501; scaffold_502; scaffold_503; scaffold_504; scaffold_505; scaffold_507; scaffold_508; scaffold_509; scaffold_51; scaffold_510; scaffold_511; scaffold_512; scaffold_513; scaffold_514; scaffold_515; scaffold_516; scaffold_517; scaffold_518; scaffold_519; scaffold_52; scaffold_520; scaffold_521; scaffold_522; scaffold_523; scaffold_524; scaffold_525; scaffold_526; scaffold_527; scaffold_528; scaffold_53; scaffold_531; scaffold_532; scaffold_533; scaffold_534; scaffold_535; scaffold_536; scaffold_537; scaffold_538; scaffold_539; scaffold_54; scaffold_540; scaffold_541; scaffold_542; scaffold_543; scaffold_545; scaffold_546; scaffold_548; scaffold_55; scaffold_550; scaffold_551; scaffold_552; scaffold_553; scaffold_554; scaffold_555; scaffold_556; scaffold_557; scaffold_558; scaffold_559; scaffold_56; scaffold_560; scaffold_561; scaffold_562; scaffold_563; scaffold_564; scaffold_565; scaffold_566; scaffold_567; scaffold_568; scaffold_569; scaffold_57; scaffold_570; scaffold_571; scaffold_572; scaffold_573; scaffold_574; scaffold_575; scaffold_576; scaffold_577; scaffold_578; scaffold_579; scaffold_58; scaffold_580; scaffold_581; scaffold_582; scaffold_583; scaffold_584; scaffold_585; scaffold_586; scaffold_587; scaffold_588; scaffold_589; scaffold_59; scaffold_590; scaffold_591; scaffold_592; scaffold_593; scaffold_594; scaffold_595; scaffold_598; scaffold_6; scaffold_60; scaffold_601; scaffold_602; scaffold_603; scaffold_604; scaffold_605; scaffold_606; scaffold_607; scaffold_608; scaffold_609; scaffold_610; scaffold_611; scaffold_612; scaffold_613; scaffold_614; scaffold_615; scaffold_616; scaffold_617; scaffold_618; scaffold_619; scaffold_62; scaffold_620; scaffold_621; scaffold_622; scaffold_623; scaffold_624; scaffold_625; scaffold_626; scaffold_627; scaffold_628; scaffold_629; scaffold_63; scaffold_630; scaffold_631; scaffold_632; scaffold_633; scaffold_634; scaffold_635; scaffold_636; scaffold_637; scaffold_638; scaffold_639; scaffold_64; scaffold_640; scaffold_641; scaffold_643; scaffold_644; scaffold_645; scaffold_646; scaffold_647; scaffold_648; scaffold_649; scaffold_65; scaffold_650; scaffold_651; scaffold_652; scaffold_653; scaffold_656; scaffold_657; scaffold_658; scaffold_659; scaffold_66; scaffold_660; scaffold_661; scaffold_662; scaffold_663; scaffold_664; scaffold_665; scaffold_666; scaffold_667; scaffold_668; scaffold_669; scaffold_67; scaffold_670; scaffold_671; scaffold_672; scaffold_674; scaffold_675; scaffold_677; scaffold_678; scaffold_679; scaffold_68; scaffold_680; scaffold_681; scaffold_682; scaffold_683; scaffold_684; scaffold_685; scaffold_687; scaffold_688; scaffold_689; scaffold_69; scaffold_690; scaffold_691; scaffold_692; scaffold_693; scaffold_694; scaffold_695; scaffold_696; scaffold_697; scaffold_699; scaffold_7; scaffold_70; scaffold_700; scaffold_701; scaffold_702; scaffold_703; scaffold_704; scaffold_705; scaffold_706; scaffold_707; scaffold_708; scaffold_709; scaffold_710; scaffold_711; scaffold_712; scaffold_713; scaffold_714; scaffold_715; scaffold_716; scaffold_717; scaffold_718; scaffold_719; scaffold_72; scaffold_720; scaffold_721; scaffold_722; scaffold_723; scaffold_724; scaffold_725; scaffold_726; scaffold_727; scaffold_728; scaffold_729; scaffold_73; scaffold_730; scaffold_731; scaffold_732; scaffold_733; scaffold_735; scaffold_736; scaffold_737; scaffold_738; scaffold_739; scaffold_74; scaffold_740; scaffold_741; scaffold_742; scaffold_743; scaffold_744; scaffold_745; scaffold_746; scaffold_747; scaffold_748; scaffold_749; scaffold_750; scaffold_751; scaffold_752; scaffold_753; scaffold_754; scaffold_755; scaffold_756; scaffold_757; scaffold_758; scaffold_759; scaffold_76; scaffold_760; scaffold_761; scaffold_762; scaffold_763; scaffold_764; scaffold_765; scaffold_766; scaffold_767; scaffold_768; scaffold_769; scaffold_77; scaffold_770; scaffold_771; scaffold_772; scaffold_773; scaffold_774; scaffold_775; scaffold_776; scaffold_777; scaffold_778; scaffold_779; scaffold_78; scaffold_780; scaffold_781; scaffold_782; scaffold_783; scaffold_784; scaffold_785; scaffold_786; scaffold_787; scaffold_788; scaffold_789; scaffold_79; scaffold_790; scaffold_791; scaffold_792; scaffold_793; scaffold_794; scaffold_795; scaffold_796; scaffold_797; scaffold_798; scaffold_799; scaffold_8; scaffold_80; scaffold_800; scaffold_801; scaffold_802; scaffold_803; scaffold_804; scaffold_805; scaffold_806; scaffold_807; scaffold_808; scaffold_809; scaffold_81; scaffold_810; scaffold_812; scaffold_813; scaffold_814; scaffold_815; scaffold_816; scaffold_817; scaffold_818; scaffold_819; scaffold_820; scaffold_821; scaffold_822; scaffold_823; scaffold_824; scaffold_825; scaffold_826; scaffold_827; scaffold_828; scaffold_829; scaffold_83; scaffold_830; scaffold_831; scaffold_832; scaffold_833; scaffold_834; scaffold_835; scaffold_836; scaffold_837; scaffold_838; scaffold_839; scaffold_84; scaffold_840; scaffold_841; scaffold_842; scaffold_843; scaffold_844; scaffold_845; scaffold_846; scaffold_847; scaffold_848; scaffold_849; scaffold_85; scaffold_850; scaffold_851; scaffold_852; scaffold_853; scaffold_854; scaffold_855; scaffold_856; scaffold_857; scaffold_858; scaffold_859; scaffold_86; scaffold_860; scaffold_861; scaffold_862; scaffold_863; scaffold_864; scaffold_865; scaffold_866; scaffold_867; scaffold_868; scaffold_869; scaffold_87; scaffold_870; scaffold_871; scaffold_872; scaffold_874; scaffold_875; scaffold_876; scaffold_877; scaffold_878; scaffold_879; scaffold_88; scaffold_880; scaffold_881; scaffold_882; scaffold_883; scaffold_884; scaffold_885; scaffold_886; scaffold_887; scaffold_888; scaffold_889; scaffold_89; scaffold_890; scaffold_891; scaffold_892; scaffold_893; scaffold_894; scaffold_895; scaffold_896; scaffold_897; scaffold_898; scaffold_899; scaffold_9; scaffold_90; scaffold_900; scaffold_901; scaffold_902; scaffold_903; scaffold_904; scaffold_905; scaffold_906; scaffold_907; scaffold_908; scaffold_909; scaffold_910; scaffold_911; scaffold_912; scaffold_913; scaffold_914; scaffold_915; scaffold_916; scaffold_917; scaffold_918; scaffold_919; scaffold_92; scaffold_920; scaffold_921; scaffold_922; scaffold_923; scaffold_924; scaffold_925; scaffold_926; scaffold_927; scaffold_928; scaffold_929; scaffold_93; scaffold_930; scaffold_931; scaffold_932; scaffold_933; scaffold_934; scaffold_935; scaffold_936; scaffold_937; scaffold_938; scaffold_939; scaffold_94; scaffold_940; scaffold_941; scaffold_942; scaffold_943; scaffold_944; scaffold_945; scaffold_946; scaffold_947; scaffold_948; scaffold_949; scaffold_950; scaffold_951; scaffold_952; scaffold_953; scaffold_954; scaffold_955; scaffold_956; scaffold_957; scaffold_958; scaffold_959; scaffold_96; scaffold_960; scaffold_961; scaffold_962; scaffold_963; scaffold_964; scaffold_965; scaffold_966; scaffold_967; scaffold_968; scaffold_969; scaffold_97; scaffold_970; scaffold_971; scaffold_972; scaffold_973; scaffold_974; scaffold_975; scaffold_976; scaffold_977; scaffold_978; scaffold_979; scaffold_98; scaffold_980; scaffold_981; scaffold_983; scaffold_984; scaffold_985; scaffold_986; scaffold_987; scaffold_988; scaffold_989; scaffold_99; scaffold_990; scaffold_991; scaffold_992; scaffold_993; scaffold_994; scaffold_995; scaffold_996; scaffold_997; scaffold_998; scaffold_999

Compact view

scaffold_1028 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 1 - 15,424 nt. (total: 15,424 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_103 - Region 1 - NRPS,T1PKS

Download region GenBank file

Download region SVG

Location: 17,835 - 84,797 nt. (total: 66,963 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 17834 - 84797:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (redmal - Gly)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1156374

Search NORINE for peptide: strict or relaxed

PKS_AT (560..873): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 62.5%; Isobutyryl-CoA: 54.2%

minowa: Isobutyryl-CoA

Prediction, score:

Isobutyryl-CoA: 81.8
Methylmalonyl-CoA: 80.2
Methoxymalonyl-CoA: 77.2
Malonyl-CoA: 62.6
Ethylmalonyl-CoA: 39.4
Propionyl-CoA: 38.0
Benzoyl-CoA: 36.6
inactive: 35.1
3-Methylbutyryl-CoA: 33.6
trans-1,2-CPDA: 27.4
2-Methylbutyryl-CoA: 25.1
fatty_acid: 14.1
Acetyl-CoA: 12.7
CHC-CoA: 8.8

AMP-binding (2799..3212): Gly

nrpys: Gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DLVYFATVQK
Nearest Stachelhaus code(s):: Gly DLVYFATVQK (85% 8� match)
Stachelhaus code match:: 100% (strong)

scaffold_1083 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 14,102 nt. (total: 14,102 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 14102:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1274420

PKS_AT (874..1164): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 111.4
inactive: 78.0
Methoxymalonyl-CoA: 57.3
Methylmalonyl-CoA: 48.5
Propionyl-CoA: 29.5
fatty_acid: 13.6
Acetyl-CoA: 13.2
2-Methylbutyryl-CoA: 12.3
Ethylmalonyl-CoA: 9.8
trans-1,2-CPDA: 9.1
Isobutyryl-CoA: 8.1
CHC-CoA: 7.2
Benzoyl-CoA: 7.2
3-Methylbutyryl-CoA: 0.0

scaffold_1111 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 13,586 nt. (total: 13,586 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 13586:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Phe)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1271073

Search NORINE for peptide: strict or relaxed

AMP-binding (623..1007): Phe

nrpys: Phe

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic (Phe, Tyr, diOH-Bz, Ph-Gly, bOH-Tyr)
Large clusters prediction:: Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DGHIYVMCGK
Nearest Stachelhaus code(s):: Phe DGHIYVMCGK (91% 8� match)
Stachelhaus code match:: 100% (strong)

scaffold_114 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 17,876 - 81,436 nt. (total: 63,561 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 17875 - 81436:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1156581

PKS_AT (904..1203): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 62.5%; inactive: 62.5%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 93.2
Methylmalonyl-CoA: 64.6
Methoxymalonyl-CoA: 59.0
inactive: 44.4
Propionyl-CoA: 37.0
Isobutyryl-CoA: 26.2
2-Methylbutyryl-CoA: 19.5
Ethylmalonyl-CoA: 18.3
CHC-CoA: 15.4
Benzoyl-CoA: 15.3
Acetyl-CoA: 11.7
3-Methylbutyryl-CoA: 11.7
fatty_acid: 11.6
trans-1,2-CPDA: 9.2

scaffold_115 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 79,146 nt. (total: 79,146 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_1152 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 12,937 nt. (total: 12,937 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_116 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 68,432 nt. (total: 68,432 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_1179 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 1 - 12,546 nt. (total: 12,546 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

scaffold_123 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 21,953 - 79,911 nt. (total: 57,959 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 21952 - 79911:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1262019

PKS_AT (579..901): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 62.5%; Propionyl-CoA: 58.3%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 83.5
Methylmalonyl-CoA: 80.3
Malonyl-CoA: 77.4
Isobutyryl-CoA: 49.1
Ethylmalonyl-CoA: 40.9
Propionyl-CoA: 31.6
3-Methylbutyryl-CoA: 30.8
Benzoyl-CoA: 26.2
inactive: 25.6
trans-1,2-CPDA: 23.4
fatty_acid: 17.9
CHC-CoA: 13.0
Acetyl-CoA: 12.2
2-Methylbutyryl-CoA: 5.7

scaffold_1234 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 11,683 nt. (total: 11,683 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 11683:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1271477

PKS_AT (906..1204): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 58.3%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 82.4
inactive: 45.9
Methoxymalonyl-CoA: 34.1
Methylmalonyl-CoA: 28.3
fatty_acid: 20.7
Propionyl-CoA: 11.6
2-Methylbutyryl-CoA: 10.5
Isobutyryl-CoA: 9.4
Benzoyl-CoA: 9.2
trans-1,2-CPDA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

scaffold_125 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 3,097 - 34,726 nt. (total: 31,630 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_129 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 51,762 - 76,611 nt. (total: 24,850 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_13 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 84,513 nt. (total: 84,513 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_13 - Region 2 - T1PKS

Download region GenBank file

Download region SVG

Location: 90,864 - 159,785 nt. (total: 68,922 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 2, location 90863 - 159785:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1074149

PKS_AT (591..902): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; 2-Methylbutyryl-CoA: 62.5%; Methylmalonyl-CoA: 62.5%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 61.7
Methoxymalonyl-CoA: 54.1
Malonyl-CoA: 38.4
Propionyl-CoA: 36.2
2-Methylbutyryl-CoA: 18.1
Isobutyryl-CoA: 18.0
Ethylmalonyl-CoA: 14.4
CHC-CoA: 13.9
Benzoyl-CoA: 13.6
trans-1,2-CPDA: 13.2
fatty_acid: 11.2
inactive: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

scaffold_1322 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 10,223 nt. (total: 10,223 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_136 - Region 1 - NRPS,T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 42,855 nt. (total: 42,855 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 42855:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1314798

PKS_AT (555..870): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methoxymalonyl-CoA: 62.5%; Methylmalonyl-CoA: 62.5%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 95.7
Methoxymalonyl-CoA: 75.9
Ethylmalonyl-CoA: 62.3
trans-1,2-CPDA: 44.0
Isobutyryl-CoA: 42.2
Malonyl-CoA: 39.0
Propionyl-CoA: 37.3
Benzoyl-CoA: 35.6
2-Methylbutyryl-CoA: 21.3
fatty_acid: 19.8
CHC-CoA: 18.7
Acetyl-CoA: 12.0
3-Methylbutyryl-CoA: 10.1
inactive: 0.0

AMP-binding (3024..3423): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVTYLAVCGK
Nearest Stachelhaus code(s):: Ala DVFSLAVVYK (53% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_1368 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 1 - 9,598 nt. (total: 9,598 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_141 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 18,227 - 75,108 nt. (total: 56,882 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_142 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 26,839 - 58,622 nt. (total: 31,784 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

scaffold_143 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 54,563 - 74,355 nt. (total: 19,793 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_147 - Region 1 - T1PKS,terpene

Download region GenBank file

Download region SVG

Location: 1 - 73,976 nt. (total: 73,976 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 73976:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 16016 - 73976:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1262478

PKS_AT (622..926): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 66.7%; Methoxymalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 91.2
Methoxymalonyl-CoA: 79.7
Malonyl-CoA: 56.3
Isobutyryl-CoA: 54.2
Propionyl-CoA: 41.5
Benzoyl-CoA: 38.5
trans-1,2-CPDA: 33.0
fatty_acid: 20.9
CHC-CoA: 17.3
2-Methylbutyryl-CoA: 16.0
inactive: 12.2
3-Methylbutyryl-CoA: 10.8
Acetyl-CoA: 8.4
Ethylmalonyl-CoA: -2.2

scaffold_15 - Region 1 - NRPS,T1PKS

Download region GenBank file

Download region SVG

Location: 112,734 - 215,988 nt. (total: 103,255 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 112733 - 215988:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (X - Leu - Val - Tyr - Val)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 112733 - 180614:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (X - Leu - Val - Tyr - Val)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 138465 - 215988:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (X - Leu - Val - Tyr - Val)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1280708

PKS_AT (513..816): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 62.5%; Propionyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 83.3
Methoxymalonyl-CoA: 63.6
Propionyl-CoA: 51.8
Malonyl-CoA: 41.7
fatty_acid: 38.5
Isobutyryl-CoA: 32.7
Benzoyl-CoA: 26.7
2-Methylbutyryl-CoA: 25.0
trans-1,2-CPDA: 23.5
CHC-CoA: 21.1
3-Methylbutyryl-CoA: 10.5
Acetyl-CoA: 5.7
inactive: 0.0
Ethylmalonyl-CoA: -4.2

1170831

Search NORINE for peptide: strict or relaxed

AMP-binding (317..718): X

nrpys: Gly, Ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Tiny, hydrophilic, transition to aliphatic (Gly, Ala)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DIGCVCAILK
Nearest Stachelhaus code(s):: Leu DIHFVGAIAK (59% 8� match); Hpg DIWHVGAITK (47% 8� match)
Stachelhaus code match:: 60% (weak)

AMP-binding (1401..1812): Leu

nrpys: Leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DILLLGAVVK
Nearest Stachelhaus code(s):: Leu DALLLGAVVK (59% 8� match)
Stachelhaus code match:: 90% (moderate)

AMP-binding (2501..2899): Val

nrpys: Val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DALFVGGIFK
Nearest Stachelhaus code(s):: Val DAMFVGGVFK (56% 8� match)
Stachelhaus code match:: 80% (moderate)

AMP-binding (3577..3971): Tyr

nrpys: Tyr

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DALALGMVVK
Nearest Stachelhaus code(s):: Tyr DALAVGEVVK (50% 8� match)
Stachelhaus code match:: 80% (moderate)

AMP-binding (4667..5062): Val

nrpys: Val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: val (Val)

Stachelhaus prediction details:

Stachelhaus sequence:: GAAFIGGTIK
Nearest Stachelhaus code(s):: Val DALFIGGTFK (47% 8� match); Leu or Ile DALFIGGTFK (47% 8� match)
Stachelhaus code match:: 70% (weak)

scaffold_152 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 51,811 nt. (total: 51,811 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_1528 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 7,092 nt. (total: 7,092 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_156 - Region 1 - NRPS,T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 69,924 nt. (total: 69,924 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 69924:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (pk - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1262655

PKS_AT (562..877): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 66.7%; Methoxymalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 73.0
Methoxymalonyl-CoA: 64.7
Ethylmalonyl-CoA: 51.7
Malonyl-CoA: 35.8
Propionyl-CoA: 27.9
Isobutyryl-CoA: 27.4
Benzoyl-CoA: 24.9
3-Methylbutyryl-CoA: 22.0
2-Methylbutyryl-CoA: 21.6
trans-1,2-CPDA: 16.2
fatty_acid: 15.3
inactive: 13.5
CHC-CoA: 10.1
Acetyl-CoA: 9.1

AMP-binding (3070..3474): X

nrpys: Orn, Lys, Arg

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Long positively charged side chain (Orn, Lys, Arg)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DMAGLGCLCK
Nearest Stachelhaus code(s):: Hpg DAAHLGLLCK (50% 8� match)
Stachelhaus code match:: 70% (weak)

207846

PKS_AT (538..840): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 62.5%; Propionyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 90.2
Methoxymalonyl-CoA: 70.4
Isobutyryl-CoA: 62.4
Ethylmalonyl-CoA: 57.8
Propionyl-CoA: 45.1
Malonyl-CoA: 45.1
Benzoyl-CoA: 31.1
2-Methylbutyryl-CoA: 28.0
trans-1,2-CPDA: 21.8
fatty_acid: 20.8
Acetyl-CoA: 16.8
CHC-CoA: 14.6
3-Methylbutyryl-CoA: 14.6
inactive: 0.0

scaffold_159 - Region 1 - indole

Download region GenBank file

Download region SVG

Location: 17,949 - 49,052 nt. (total: 31,104 nt) Show pHMM detection rules used

indole: (indsynth or dmat or indole_PTase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_16 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 28,649 - 97,632 nt. (total: 68,984 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 28648 - 97632:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1074509

PKS_AT (530..842): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 62.5%; Methoxymalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 74.1
Methoxymalonyl-CoA: 68.0
Ethylmalonyl-CoA: 43.9
Isobutyryl-CoA: 37.9
Malonyl-CoA: 31.9
Benzoyl-CoA: 28.1
trans-1,2-CPDA: 26.9
Propionyl-CoA: 20.1
fatty_acid: 19.9
3-Methylbutyryl-CoA: 14.7
CHC-CoA: 14.1
2-Methylbutyryl-CoA: 12.5
inactive: 0.0
Acetyl-CoA: 0.0

scaffold_163 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 22,756 - 54,530 nt. (total: 31,775 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_167 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 38,687 nt. (total: 38,687 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

NRPS/PKS monomers

NRPS/PKS monomer predictions

1262836

PKS_AT (477..787): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 62.5%; Ethylmalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 59.3
Methoxymalonyl-CoA: 51.6
Propionyl-CoA: 35.0
Ethylmalonyl-CoA: 30.2
Isobutyryl-CoA: 27.7
Malonyl-CoA: 11.1
CHC-CoA: 10.8
fatty_acid: 9.7
Benzoyl-CoA: 7.7
2-Methylbutyryl-CoA: 0.8
trans-1,2-CPDA: 0.0
inactive: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

scaffold_174 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 67,304 nt. (total: 67,304 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 67304:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1262971

PKS_AT (567..878): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 66.7%; 2-Methylbutyryl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 71.9
Methoxymalonyl-CoA: 61.7
Malonyl-CoA: 52.7
Ethylmalonyl-CoA: 31.9
Propionyl-CoA: 30.4
trans-1,2-CPDA: 22.1
fatty_acid: 18.4
Acetyl-CoA: 14.8
Isobutyryl-CoA: 14.7
2-Methylbutyryl-CoA: 14.7
Benzoyl-CoA: 13.1
CHC-CoA: 11.0
inactive: 10.8
3-Methylbutyryl-CoA: 8.7

scaffold_18 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 48,370 - 116,291 nt. (total: 67,922 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 48369 - 116291:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1283523

PKS_AT (891..1181): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 54.2%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 45.7
Malonyl-CoA: 40.5
Methylmalonyl-CoA: 34.2
trans-1,2-CPDA: 16.1
CHC-CoA: 15.3
inactive: 15.2
Ethylmalonyl-CoA: 14.4
Propionyl-CoA: 14.1
2-Methylbutyryl-CoA: 9.4
fatty_acid: 9.2
Benzoyl-CoA: 9.2
Isobutyryl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

scaffold_181 - Region 1 - T1PKS,indole

Download region GenBank file

Download region SVG

Location: 1,138 - 66,744 nt. (total: 65,607 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
indole: (indsynth or dmat or indole_PTase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 1137 - 66744:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1263102

PKS_AT (940..1238): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; inactive: 62.5%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 101.2
inactive: 77.1
Methylmalonyl-CoA: 58.9
Methoxymalonyl-CoA: 48.3
Propionyl-CoA: 41.3
Benzoyl-CoA: 22.3
fatty_acid: 21.7
2-Methylbutyryl-CoA: 20.7
Isobutyryl-CoA: 18.6
CHC-CoA: 18.4
Ethylmalonyl-CoA: 17.8
trans-1,2-CPDA: 15.1
Acetyl-CoA: 12.0
3-Methylbutyryl-CoA: 9.2

1081605

AMP-binding (153..561): X

nrpys: Phe, Trp, Ph-Gly, Tyr, bOH-Tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic (Phe, Tyr, diOH-Bz, Ph-Gly, bOH-Tyr)
Large clusters prediction:: Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: --AVQGNGSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

scaffold_183 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 5,261 - 66,087 nt. (total: 60,827 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 5260 - 66087:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1263143

PKS_AT (591..909): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 66.7%; 2-Methylbutyryl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 66.5
Methoxymalonyl-CoA: 57.6
Malonyl-CoA: 32.6
Propionyl-CoA: 29.0
Ethylmalonyl-CoA: 26.5
2-Methylbutyryl-CoA: 24.5
fatty_acid: 19.7
Isobutyryl-CoA: 17.5
3-Methylbutyryl-CoA: 14.5
trans-1,2-CPDA: 13.7
Benzoyl-CoA: 9.3
inactive: 0.0
CHC-CoA: 0.0
Acetyl-CoA: 0.0

scaffold_190 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 8,662 - 65,011 nt. (total: 56,350 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 8661 - 65011:

Rough prediction of core scaffold based on assumed PKS linker matching; tailoring reactions not taken into account

Polymer prediction:: (pk)
Non-colinear ordering:: 1081922 + 1081918

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1081922

PKS_AT (603..922): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 58.3%; Ethylmalonyl-CoA: 54.2%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 81.9
Methoxymalonyl-CoA: 77.6
Malonyl-CoA: 65.0
Ethylmalonyl-CoA: 50.5
Isobutyryl-CoA: 31.4
trans-1,2-CPDA: 24.6
fatty_acid: 24.2
Propionyl-CoA: 17.8
Benzoyl-CoA: 17.1
3-Methylbutyryl-CoA: 14.5
inactive: 13.0
CHC-CoA: 11.5
2-Methylbutyryl-CoA: 8.7
Acetyl-CoA: 6.6

scaffold_192 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 15,060 - 64,605 nt. (total: 49,546 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 15059 - 64605:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1263310

PKS_AT (637..951): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 62.5%; Ethylmalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 71.4
Methoxymalonyl-CoA: 64.6
Malonyl-CoA: 63.7
Propionyl-CoA: 38.2
Ethylmalonyl-CoA: 29.6
inactive: 19.5
CHC-CoA: 16.7
Benzoyl-CoA: 13.7
Isobutyryl-CoA: 9.6
2-Methylbutyryl-CoA: 4.0
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0
Acetyl-CoA: -1.5

scaffold_209 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 1 - 33,922 nt. (total: 33,922 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 33922:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

297980

AMP-binding (61..474): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: IALISSTLLK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

scaffold_21 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 64,579 nt. (total: 64,579 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 64579:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1259041

PKS_AT (603..929): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 66.7%; Ethylmalonyl-CoA: 58.3%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 80.3
Methylmalonyl-CoA: 75.5
Malonyl-CoA: 66.5
Isobutyryl-CoA: 42.2
Ethylmalonyl-CoA: 37.0
trans-1,2-CPDA: 29.8
inactive: 27.7
CHC-CoA: 27.1
fatty_acid: 25.6
2-Methylbutyryl-CoA: 21.6
3-Methylbutyryl-CoA: 18.6
Propionyl-CoA: 17.9
Benzoyl-CoA: 14.3
Acetyl-CoA: 6.6

scaffold_215 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 60,614 nt. (total: 60,614 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_221 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 59,818 nt. (total: 59,818 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 59818:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1082851

PKS_AT (913..1205): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 62.5%; Ethylmalonyl-CoA: 58.3%; Methylmalonyl-CoA: 58.3%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 54.1
inactive: 53.6
Methylmalonyl-CoA: 46.1
Malonyl-CoA: 36.8
Propionyl-CoA: 28.5
CHC-CoA: 26.5
Ethylmalonyl-CoA: 22.7
2-Methylbutyryl-CoA: 18.9
fatty_acid: 18.1
trans-1,2-CPDA: 17.9
Acetyl-CoA: 17.8
Benzoyl-CoA: 15.4
3-Methylbutyryl-CoA: 14.1
Isobutyryl-CoA: 12.8

scaffold_226 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 11,315 - 59,448 nt. (total: 48,134 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 11314 - 59448:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1263883

PKS_AT (580..873): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; Methylmalonyl-CoA: 70.8%; Ethylmalonyl-CoA: 66.7%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 111.5
Ethylmalonyl-CoA: 88.1
Methoxymalonyl-CoA: 86.9
Malonyl-CoA: 64.1
Isobutyryl-CoA: 63.3
trans-1,2-CPDA: 38.6
2-Methylbutyryl-CoA: 36.8
Propionyl-CoA: 36.5
Acetyl-CoA: 32.9
fatty_acid: 26.2
CHC-CoA: 24.0
Benzoyl-CoA: 23.7
3-Methylbutyryl-CoA: 13.0
inactive: 0.0

scaffold_227 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 59,307 nt. (total: 59,307 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_235 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 58,305 nt. (total: 58,305 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_240 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 57,383 nt. (total: 57,383 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_244 - Region 1 - NRPS-like,T1PKS

Download region GenBank file

Download region SVG

Location: 6,719 - 56,916 nt. (total: 50,198 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 6718 - 56916:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X) + (mal)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 13691 - 56916:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X) + (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

349436

PKS_AT (907..1209): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 62.5%; Propionyl-CoA: 54.2%; inactive: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 72.8
Methoxymalonyl-CoA: 61.7
Methylmalonyl-CoA: 60.2
inactive: 48.4
Isobutyryl-CoA: 29.8
Benzoyl-CoA: 25.9
Ethylmalonyl-CoA: 22.0
Propionyl-CoA: 15.5
fatty_acid: 13.3
2-Methylbutyryl-CoA: 9.6
trans-1,2-CPDA: 9.5
CHC-CoA: 9.4
Acetyl-CoA: 4.3
3-Methylbutyryl-CoA: -1.8

1264181

AMP-binding (106..433): X

nrpys: Gly, Ala, Val, Leu, Ile, Abu, Ival

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: GFLMAGHALK
Nearest Stachelhaus code(s):: meOrs GFVMLGHLGK (62% 8� match); Val DALFAGGALK (35% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_25 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 56,668 - 125,224 nt. (total: 68,557 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 56667 - 125224:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1252408

PKS_AT (601..926): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 75.0%; Ethylmalonyl-CoA: 66.7%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 64.5
Methoxymalonyl-CoA: 62.2
Malonyl-CoA: 55.5
Ethylmalonyl-CoA: 36.9
Isobutyryl-CoA: 33.8
Propionyl-CoA: 32.2
inactive: 26.0
fatty_acid: 20.7
Benzoyl-CoA: 18.7
Acetyl-CoA: 15.0
CHC-CoA: 11.2
2-Methylbutyryl-CoA: 8.8
trans-1,2-CPDA: 8.0
3-Methylbutyryl-CoA: -2.9

scaffold_265 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 54,683 nt. (total: 54,683 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 54683:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Ala)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1084091

Search NORINE for peptide: strict or relaxed

AMP-binding (61..462): Ala

nrpys: Ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: Tiny, hydrophilic, transition to aliphatic (Gly, Ala)
Single AA prediction:: ala (Ala)

Stachelhaus prediction details:

Stachelhaus sequence:: AMFACSGPIK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

scaffold_266 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 37,766 - 54,625 nt. (total: 16,860 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_28 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 1 - 51,990 nt. (total: 51,990 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_289 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 17,953 - 51,597 nt. (total: 33,645 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

NRPS/PKS monomers

NRPS/PKS monomer predictions

1264812

AMP-binding (36..426): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: -LNVMAFILK
Nearest Stachelhaus code(s):: Ala DLLVVAGILK (32% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_293 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 2,275 - 51,343 nt. (total: 49,069 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 2274 - 51343:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1084884

PKS_AT (917..1207): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 104.9
Methoxymalonyl-CoA: 62.4
Methylmalonyl-CoA: 56.0
inactive: 51.1
Propionyl-CoA: 30.3
Ethylmalonyl-CoA: 26.4
2-Methylbutyryl-CoA: 22.3
fatty_acid: 22.0
CHC-CoA: 18.0
3-Methylbutyryl-CoA: 18.0
Isobutyryl-CoA: 16.9
Benzoyl-CoA: 15.3
Acetyl-CoA: 14.3
trans-1,2-CPDA: 9.8

scaffold_304 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 11,046 - 50,121 nt. (total: 39,076 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 11045 - 50121:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1085148

AMP-binding (44..363): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: -VFYISYQIK
Nearest Stachelhaus code(s):: Pro DVQYISGVIK (38% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_309 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 3,909 - 35,135 nt. (total: 31,227 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_360 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 45,854 nt. (total: 45,854 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_367 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 1 - 45,334 nt. (total: 45,334 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 45334:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1086686

AMP-binding (36..440): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: GGFFTAIAVK
Nearest Stachelhaus code(s):: Ile or Val DGLFVGIAVK (35% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_368 - Region 1 - T1PKS,terpene

Download region GenBank file

Download region SVG

Location: 1 - 45,268 nt. (total: 45,268 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 45268:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1293255

PKS_AT (541..860): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 70.8%; Methylmalonyl-CoA: 58.3%; Propionyl-CoA: 54.2%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 72.8
Methoxymalonyl-CoA: 68.3
Malonyl-CoA: 59.7
Isobutyryl-CoA: 51.6
Ethylmalonyl-CoA: 42.9
Propionyl-CoA: 28.6
3-Methylbutyryl-CoA: 24.4
Benzoyl-CoA: 24.3
inactive: 19.7
fatty_acid: 12.0
2-Methylbutyryl-CoA: 7.1
trans-1,2-CPDA: 4.9
CHC-CoA: 0.0
Acetyl-CoA: 0.0

scaffold_37 - Region 1 - indole

Download region GenBank file

Download region SVG

Location: 1 - 25,124 nt. (total: 25,124 nt) Show pHMM detection rules used

Region on contig edge.

indole: (indsynth or dmat or indole_PTase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_372 - Region 1 - NRPS,indole

Download region GenBank file

Download region SVG

Location: 1 - 44,781 nt. (total: 44,781 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
indole: (indsynth or dmat or indole_PTase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 44781:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1086773

AMP-binding (29..407): X

nrpys: Val, Leu, Ile, Abu, Ival

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAGPYGCCAK
Nearest Stachelhaus code(s):: Phe DAGALGACAK (68% 8� match); Trp DAGIVGACAK (56% 8� match)
Stachelhaus code match:: 70% (weak)

AMP-binding (1061..1444): X

nrpys: 6-clTrp

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAAMLGGVGK
Nearest Stachelhaus code(s):: 6-clTrp DAAMCGGVAK (44% 8� match)
Stachelhaus code match:: 80% (moderate)

scaffold_400 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 1 - 18,459 nt. (total: 18,459 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_402 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 944 - 41,973 nt. (total: 41,030 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 943 - 41973:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

537465

PKS_AT (530..843): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; Methylmalonyl-CoA: 62.5%; Isobutyryl-CoA: 62.5%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 93.2
Methoxymalonyl-CoA: 88.1
Malonyl-CoA: 69.4
Isobutyryl-CoA: 66.5
Propionyl-CoA: 48.5
Ethylmalonyl-CoA: 45.7
Benzoyl-CoA: 40.5
inactive: 38.9
2-Methylbutyryl-CoA: 31.3
3-Methylbutyryl-CoA: 22.2
trans-1,2-CPDA: 21.7
CHC-CoA: 13.8
Acetyl-CoA: 12.6
fatty_acid: 12.5

1294493

AMP-binding (48..492): X

nrpys: Val, Leu, Ile, Abu, Ival

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: GSGYISCPVK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

scaffold_414 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 1 - 23,703 nt. (total: 23,703 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_420 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 40,796 nt. (total: 40,796 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 40796:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1266416

PKS_AT (551..845): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 58.3%; inactive: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 55.3
inactive: 50.4
Methoxymalonyl-CoA: 35.6
Methylmalonyl-CoA: 35.3
Propionyl-CoA: 16.3
CHC-CoA: 10.9
Benzoyl-CoA: 10.1
2-Methylbutyryl-CoA: 10.0
Ethylmalonyl-CoA: 9.9
fatty_acid: 9.5
trans-1,2-CPDA: 0.0
Isobutyryl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

scaffold_432 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 39,836 nt. (total: 39,836 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 39836:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

565180

PKS_AT (905..1203): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; inactive: 58.3%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 122.0
Methylmalonyl-CoA: 70.7
Methoxymalonyl-CoA: 70.7
inactive: 69.9
Propionyl-CoA: 44.2
Ethylmalonyl-CoA: 36.6
Acetyl-CoA: 33.0
2-Methylbutyryl-CoA: 26.3
CHC-CoA: 23.9
Benzoyl-CoA: 20.2
Isobutyryl-CoA: 19.4
3-Methylbutyryl-CoA: 17.4
fatty_acid: 16.5
trans-1,2-CPDA: 12.3

scaffold_450 - Region 1 - indole

Download region GenBank file

Download region SVG

Location: 1 - 18,195 nt. (total: 18,195 nt) Show pHMM detection rules used

Region on contig edge.

indole: (indsynth or dmat or indole_PTase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_459 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 3,731 - 38,280 nt. (total: 34,550 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

NRPS/PKS monomers

NRPS/PKS monomer predictions

1266847

AMP-binding (263..657): X

nrpys: Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVMHSGCACK
Nearest Stachelhaus code(s):: Glu DVTHSGSVTK (62% 8� match); Leu DAMLVGAACK (50% 8� match); Hpg DVYHLGLLCK (44% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_463 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 1 - 26,708 nt. (total: 26,708 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_464 - Region 1 - indole

Download region GenBank file

Download region SVG

Location: 15,754 - 38,112 nt. (total: 22,359 nt) Show pHMM detection rules used

Region on contig edge.

indole: (indsynth or dmat or indole_PTase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

scaffold_484 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 70 - 31,272 nt. (total: 31,203 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_489 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 36,188 nt. (total: 36,188 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 36188:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1267156

PKS_AT (909..1204): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 54.2%; Isobutyryl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 96.4
Methylmalonyl-CoA: 65.4
Methoxymalonyl-CoA: 56.8
inactive: 54.3
Propionyl-CoA: 50.5
2-Methylbutyryl-CoA: 34.5
CHC-CoA: 21.1
Ethylmalonyl-CoA: 18.3
Benzoyl-CoA: 17.8
Isobutyryl-CoA: 17.2
fatty_acid: 15.4
Acetyl-CoA: 14.6
trans-1,2-CPDA: 11.6
3-Methylbutyryl-CoA: 10.3

scaffold_49 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 47,523 - 122,700 nt. (total: 75,178 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 47522 - 122700:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - Ala) + (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1246279

AMP-binding (474..861): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DIQSAVGAIK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

1076842

AMP-binding (38..458): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: GLGYVGGVIK
Nearest Stachelhaus code(s):: nohBza GLGLVGAIIK (35% 8� match); Abu DLGYVAGVFK (29% 8� match)
Stachelhaus code match:: 70% (weak)

1260183

Search NORINE for peptide: strict or relaxed

AMP-binding (882..1276): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DISNVAAILK
Nearest Stachelhaus code(s):: bOH-Tyr DTSKVAAICK (56% 8� match)
Stachelhaus code match:: 70% (weak)

AMP-binding (1970..2372): Ala

nrpys: Ala

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: ala (Ala)

Stachelhaus prediction details:

Stachelhaus sequence:: DVQGVNSINK
Nearest Stachelhaus code(s):: Gln DVQIVGGIHK (76% 8� match); bOH-Gln DAQNIASINK (68% 8� match); Arg DVENVGAINK (41% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_492 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 586 - 36,132 nt. (total: 35,547 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 585 - 36132:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1267191

PKS_AT (597..889): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 70.8%; CE-Malonyl-CoA: 62.5%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 104.8
Methoxymalonyl-CoA: 88.6
Ethylmalonyl-CoA: 77.9
Malonyl-CoA: 56.7
Isobutyryl-CoA: 56.1
Propionyl-CoA: 46.6
Acetyl-CoA: 41.9
2-Methylbutyryl-CoA: 41.3
trans-1,2-CPDA: 35.4
Benzoyl-CoA: 32.1
3-Methylbutyryl-CoA: 28.8
fatty_acid: 24.5
CHC-CoA: 13.2
inactive: 0.0

scaffold_499 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 35,954 nt. (total: 35,954 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_50 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 65,111 - 122,348 nt. (total: 57,238 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_506 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 35,600 nt. (total: 35,600 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 35600:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1089558

PKS_AT (919..1213): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 62.5%; Ethylmalonyl-CoA: 54.2%; inactive: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 58.4
Methoxymalonyl-CoA: 54.2
Methylmalonyl-CoA: 47.2
inactive: 41.6
fatty_acid: 21.4
Ethylmalonyl-CoA: 21.2
Propionyl-CoA: 15.8
CHC-CoA: 15.0
trans-1,2-CPDA: 0.0
Isobutyryl-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

scaffold_529 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 33,900 nt. (total: 33,900 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_530 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 33,782 nt. (total: 33,782 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_544 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 1 - 32,975 nt. (total: 32,975 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 32975:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1090218

AMP-binding (45..377): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: HGACGGRFLK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

scaffold_547 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 32,743 nt. (total: 32,743 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 32743:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1267682

AMP-binding (57..442): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: SARESGAQLK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

AMP-binding (1092..1481): X

nrpys: Gly, Ala, Val, Leu, Ile, Abu, Ival

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAYMNCGILK
Nearest Stachelhaus code(s):: Val DAWMFAAILK (53% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_549 - Region 1 - NRPS,T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 32,714 nt. (total: 32,714 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 32714:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1267698

PKS_AT (551..866): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 66.7%; Ethylmalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 87.8
Methoxymalonyl-CoA: 73.7
Ethylmalonyl-CoA: 64.6
Isobutyryl-CoA: 51.4
Malonyl-CoA: 32.3
Benzoyl-CoA: 31.5
trans-1,2-CPDA: 30.7
Propionyl-CoA: 29.4
fatty_acid: 28.1
2-Methylbutyryl-CoA: 27.6
3-Methylbutyryl-CoA: 17.3
CHC-CoA: 16.5
inactive: 11.1
Acetyl-CoA: 3.3

AMP-binding (3028..3431): X

nrpys: Orn, Lys, Arg

SVM prediction details:

Predicted physicochemical class:: hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
Large clusters prediction:: Long positively charged side chain (Orn, Lys, Arg)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DLAKFGCISK
Nearest Stachelhaus code(s):: MalAc NHDKFGSISK (59% 8� match); Hty DLAFTGCVTK (56% 8� match); 3Me-Glu DLGKTGVINK (53% 8� match); Asp DLTKVGHIGK (50% 8� match); Asn DLTKVGDVSK (47% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_596 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 1 - 29,645 nt. (total: 29,645 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 29645:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1091141

AMP-binding (24..371): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: GLNLIGLVLK
Nearest Stachelhaus code(s):: 2S-Hic GANLIGATIK (32% 8� match); Hpea or dohPen GANLIGATVK (29% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_597 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 1 - 29,552 nt. (total: 29,552 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 29552:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1268117

AMP-binding (28..430): X

nrpys: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: VATFPGAAGK
Nearest Stachelhaus code(s):: Ppa VATFIGGAGK (74% 8� match)
Stachelhaus code match:: 80% (moderate)

scaffold_599 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 29,503 nt. (total: 29,503 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_600 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 29,484 nt. (total: 29,484 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_61 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 1 - 28,783 nt. (total: 28,783 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_642 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 27,880 nt. (total: 27,880 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

NRPS/PKS monomers

NRPS/PKS monomer predictions

1256033

AMP-binding (46..347): X

nrpys: (unknown)

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: --AVAGF--K
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

1268504

PKS_AT (563..803): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 66.7%; Methylmalonyl-CoA: 54.2%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 32.7
Methylmalonyl-CoA: 23.4
Malonyl-CoA: 18.3
fatty_acid: 14.8
Isobutyryl-CoA: 12.2
2-Methylbutyryl-CoA: 10.5
Benzoyl-CoA: 9.6
Ethylmalonyl-CoA: 9.3
trans-1,2-CPDA: 0.0
inactive: 0.0
Propionyl-CoA: 0.0
CHC-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

scaffold_654 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 27,522 nt. (total: 27,522 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 27522:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-X - X - X - D-X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1092059

AMP-binding (245..641): X

nrpys: nDodec

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVLFVGGVAK
Nearest Stachelhaus code(s):: nDodec DVLFIGGVAK (79% 8� match)
Stachelhaus code match:: 90% (moderate)

AMP-binding (1784..2187): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVQDSGVVTK
Nearest Stachelhaus code(s):: dn-dohHep DVFDFGGVTK (59% 8� match); Gln or Glu DAQDLGVVDK (56% 8� match); Ile DAQDLGVVDK (53% 8� match); Ahp DVENAGVVTK (44% 8� match)
Stachelhaus code match:: 70% (weak)

AMP-binding (2903..3298): X

nrpys: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVSFAGSIWK
Nearest Stachelhaus code(s):: Asn DVAFTGSIWK (76% 8� match)
Stachelhaus code match:: 80% (moderate)

AMP-binding (3979..4371): X

nrpys: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVGYSGIIWK
Nearest Stachelhaus code(s):: Ser DVAYSGMIWK (74% 8� match)
Stachelhaus code match:: 80% (moderate)

scaffold_655 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 27,516 nt. (total: 27,516 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_673 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 26,692 nt. (total: 26,692 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 26692:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

768635

PKS_AT (914..1206): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 58.3%; inactive: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 54.2
Methoxymalonyl-CoA: 50.2
inactive: 46.2
Methylmalonyl-CoA: 42.2
fatty_acid: 30.9
Ethylmalonyl-CoA: 22.6
CHC-CoA: 19.6
Propionyl-CoA: 18.5
trans-1,2-CPDA: 17.3
2-Methylbutyryl-CoA: 17.2
Benzoyl-CoA: 14.8
Isobutyryl-CoA: 14.6
3-Methylbutyryl-CoA: 13.2
Acetyl-CoA: 11.1

scaffold_676 - Region 1 - NRP-metallophore,NRPS

Download region GenBank file

Download region SVG

Location: 1 - 26,617 nt. (total: 26,617 nt) Show pHMM detection rules used

Region on contig edge.

NRP-metallophore: (VibH_like or Cy_tandem or (cds(Condensation and AMP-binding) and ((IBH_Asp and not SBH_Asp) or IBH_His or TBH_Asp or CyanoBH_Asp1 or CyanoBH_Asp2 or IPL or SalSyn or (EntA and EntC) or (GrbD and GrbE) or (FbnL and FbnM) or PvdO or PvdP or (Orn_monoox and not (KtzT or MetRS-like)) or Lys_monoox or VbsL)))
NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 26617:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1268758

AMP-binding (189..583): X

nrpys: Phe, Tyr, diOH-Bz, Ph-Gly, bOH-Tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic (Phe, Tyr, diOH-Bz, Ph-Gly, bOH-Tyr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVFELIMIHK
Nearest Stachelhaus code(s):: Orn DVSELGTINK (59% 8� match); Dab DVGELSSIDK (44% 8� match); Ser DLFNLGLIHK (38% 8� match)
Stachelhaus code match:: 60% (weak)

AMP-binding (1243..1665): X

nrpys: Gly, Ala, Val, Leu, Ile, Abu, Ival

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVFSVAGNIK
Nearest Stachelhaus code(s):: Ala DVFSVALVYK (62% 8� match)
Stachelhaus code match:: 70% (weak)

AMP-binding (2873..3279): X

nrpys: (unknown)

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVLDIGGIGK
Nearest Stachelhaus code(s):: nDodec DVLFIGGVAK (53% 8� match)
Stachelhaus code match:: 70% (weak)

scaffold_686 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 26,110 nt. (total: 26,110 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_698 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 1 - 25,684 nt. (total: 25,684 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 25684:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Aad)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1226104

Search NORINE for peptide: strict or relaxed

AMP-binding (268..738): Aad

nrpys: Aad

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DPRHFVMRAK
Nearest Stachelhaus code(s):: Aad DPRHFVMRAK (100% 8� match)
Stachelhaus code match:: 100% (strong)

scaffold_71 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 22,907 - 90,551 nt. (total: 67,645 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 22906 - 90551:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1260783

PKS_AT (924..1219): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 54.2%

minowa: inactive

Prediction, score:

inactive: 52.7
Malonyl-CoA: 52.3
Methoxymalonyl-CoA: 50.0
Methylmalonyl-CoA: 43.1
Ethylmalonyl-CoA: 28.2
Propionyl-CoA: 28.0
CHC-CoA: 25.5
2-Methylbutyryl-CoA: 19.1
trans-1,2-CPDA: 17.4
Isobutyryl-CoA: 15.9
Benzoyl-CoA: 14.5
3-Methylbutyryl-CoA: 12.5
Acetyl-CoA: 12.3
fatty_acid: 11.7

scaffold_734 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 24,120 nt. (total: 24,120 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 24120:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1250233

PKS_AT (552..886): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; Methylmalonyl-CoA: 66.7%; Ethylmalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 60.3
Methoxymalonyl-CoA: 60.2
Isobutyryl-CoA: 29.5
Malonyl-CoA: 27.0
Ethylmalonyl-CoA: 24.0
Propionyl-CoA: 23.4
fatty_acid: 19.7
2-Methylbutyryl-CoA: 14.5
Benzoyl-CoA: 14.4
inactive: 13.1
CHC-CoA: 10.1
trans-1,2-CPDA: 7.5
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

scaffold_75 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 1 - 35,976 nt. (total: 35,976 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 35976:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1260862

AMP-binding (34..441): X

nrpys: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: VASFIGGAGK
Nearest Stachelhaus code(s):: Ppa VATFIGGAGK (91% 8� match)
Stachelhaus code match:: 90% (moderate)

scaffold_811 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 21,664 nt. (total: 21,664 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_82 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 58,461 - 94,128 nt. (total: 35,668 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

NRPS/PKS monomers

NRPS/PKS monomer predictions

1261072

PKS_AT (474..721): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 70.8%; Propionyl-CoA: 54.2%; 2-Methylbutyryl-CoA: 54.2%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 59.2
Methoxymalonyl-CoA: 53.4
Ethylmalonyl-CoA: 36.8
Propionyl-CoA: 27.6
trans-1,2-CPDA: 20.2
Malonyl-CoA: 19.9
fatty_acid: 18.4
Isobutyryl-CoA: 17.0
CHC-CoA: 13.8
2-Methylbutyryl-CoA: 10.7
Benzoyl-CoA: 10.5
3-Methylbutyryl-CoA: 4.0
inactive: 0.0
Acetyl-CoA: 0.0

scaffold_873 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 19,604 nt. (total: 19,604 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 19604:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1269993

PKS_AT (904..1200): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 103.8
Methylmalonyl-CoA: 61.1
Methoxymalonyl-CoA: 57.4
inactive: 46.3
Propionyl-CoA: 34.8
Isobutyryl-CoA: 32.2
2-Methylbutyryl-CoA: 29.7
Ethylmalonyl-CoA: 17.9
Benzoyl-CoA: 16.0
CHC-CoA: 14.3
3-Methylbutyryl-CoA: 12.1
fatty_acid: 10.7
trans-1,2-CPDA: 9.3
Acetyl-CoA: 8.1

scaffold_91 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 42,852 nt. (total: 42,852 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 42852:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1261265

AMP-binding (265..643): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: SARENGAQMK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

AMP-binding (1289..1676): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAYMNCGILK
Nearest Stachelhaus code(s):: Val DAWMFAAILK (50% 8� match)
Stachelhaus code match:: 60% (weak)

scaffold_95 - Region 1 - fungal-RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 57,731 nt. (total: 57,731 nt) Show pHMM detection rules used

Region on contig edge.

fungal-RiPP-like: DUF3328

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

scaffold_982 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 16,474 nt. (total: 16,474 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 16474:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

1096121

PKS_AT (541..849): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; Methylmalonyl-CoA: 66.7%; Ethylmalonyl-CoA: 62.5%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 96.0
Methoxymalonyl-CoA: 88.3
Ethylmalonyl-CoA: 64.7
Malonyl-CoA: 62.7
Isobutyryl-CoA: 60.9
2-Methylbutyryl-CoA: 45.4
Propionyl-CoA: 37.5
Benzoyl-CoA: 36.7
inactive: 31.6
trans-1,2-CPDA: 27.5
3-Methylbutyryl-CoA: 21.3
fatty_acid: 16.1
CHC-CoA: 10.3
Acetyl-CoA: 2.2